Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1582 ATGGTTTCCGCCCAGTTCTCTATCTTGAATGAAAATGGTTCACAGAAGCATTTCCTGAATCAGTTGCTTCTACCAAATGGGCCGCCTGATCGTTTGCCTTCTTCCAATTGTGTGGATTTTGAATTTTCTGATGTGTTTGGACCATCTCCTGTTGAAGCCTCAAATTCAATATCAGTAAGCTCTGAGAAACATGGGAATTCAGTAGCTACACGAGGTTCAAGTGAAAATATTTACAAGGATCCTGATTGCATTCACATCCGCTCTCAATCTTTATTGGCTCCCACAACCTGTATTGGTCAGTCCTTGCAACTTAGCAAGCTCACCTTTCATGAGACAGATGATGCATTGGATCTTGTGGAGGAGGTCTTTATAGAAACACATGAAGAACTTAAGGAATATTCTGTTAATAATTACTGTCTGAATAATCAGACTATTGGTGTTCAGGATTTTGAAGTGTTGAAGGTTGTTGGCCAAGGTGCTTTTGGTAAGGTGTATCAGGTGAGGAGGACTGGTACTTCTGAAATATATGCTATGAAGGTCATGCGAAAGGATAAGATCATGCAGAGAAACCATGCTGAATATGTCAAATCTGAAAGGGATATATTGACAAAGCTGGACAACCCATTTGTTGTGCGGATCAGATATGCATTCCAAACCAAATACAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCATCTCTATCACCAAGGCCTATTTAGGGAAGATTTGGCTCGCTTCTATGCTGCAGAGATTATTTGTGCTGTTTCTTATCTTCATGCAAATGATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTTGATGCAGATGGTCATGCAGTGTTAACAGATTTTGGCCTGGCTAAGAAGTTCAATGAGAATGAAAGGTCAAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTTATGGGAAAAGGCCATGATAAGGCAGCTGATTGGTGGAGTGTGGGGATTTTACTATATGAAATGCTTACAGGAAAGCCTCCTTTCTCTGGTGGAAATAGACACAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCAGCTTTTTTGTCAAATGAGGCACATTCACTGTTAAAAGGGTTGTTGCAGAAAGATGTCAGTAAACGCCTTGGCAGTGGATCGAGAGGCAGTGAGGAGATTAAAAGCCACAAGTGGTTTAAATTAGTCAATTGGAAGAAACTGGAATGCCGTGAAACTAGGCCAAGCTTTGTCCCAGATGTTGCTGGGAAGCACTGTGTTGCTAACTTCGAGGAGCGGTGGACTAGTATGCCCTTGCTGAATTCTCCAGCTGCCAGTCCCAAAAAGGATGACAATACATTCAACAAGTTCTCATATTCTGGTACTCCGGTTGCGTCATGA 1419 0.4144 MVSAQFSILNENGSQKHFLNQLLLPNGPPDRLPSSNCVDFEFSDVFGPSPVEASNSISVSSEKHGNSVATRGSSENIYKDPDCIHIRSQSLLAPTTCIGQSLQLSKLTFHETDDALDLVEEVFIETHEELKEYSVNNYCLNNQTIGVQDFEVLKVVGQGAFGKVYQVRRTGTSEIYAMKVMRKDKIMQRNHAEYVKSERDILTKLDNPFVVRIRYAFQTKYRLYLVLDFVNGGHLFFHLYHQGLFREDLARFYAAEIICAVSYLHANDIMHRDLKPENILLDADGHAVLTDFGLAKKFNENERSNSMCGTVEYMAPEIVMGKGHDKAADWWSVGILLYEMLTGKPPFSGGNRHKIQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRGSEEIKSHKWFKLVNWKKLECRETRPSFVPDVAGKHCVANFEERWTSMPLLNSPAASPKKDDNTFNKFSYSGTPVAS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1582 472 SUPERFAMILY Protein kinase-like (PK-like) 135 450 IPR011009 -
Gso14g1582 472 MobiDBLite consensus disorder prediction 447 472 - -
Gso14g1582 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Gso14g1582 472 SMART serkin_6 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1582 472 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Gso14g1582 472 ProSiteProfiles Protein kinase domain profile. 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1582 472 SMART pkinase_C_6 407 467 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso14g1582 472 Pfam Protein kinase domain 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1582 472 CDD STKc_AGC 156 406 IPR045270 GO:0004674|GO:0005524
Gso14g1582 472 Gene3D Phosphorylase Kinase; domain 1 148 449 - -
Gso14g1582 472 ProSiteProfiles AGC-kinase C-terminal domain profile. 407 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso14g1582 472 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 468 - -
Gso14g1582 472 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 468 - -
Gso14g1582 472 Gene3D Transferase(Phosphotransferase) domain 1 230 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1582 Gso-Chr14 47771407 47775445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1582 1 469 AGC Kinase Gene Family AT3G08720 61.088 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Gso14g1582 Pkinase 1.9e-75 CL0016