Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1566 ATGAATAACACCCTTTGTCCTGAAAGTGAAATTAGTATCTCAGCCAAAAAGAACAGAATGATAATGAAAGAACTTGTTAAGGGTCAGGAATCTGCTACTCAACTCAAGGTTCTTCTTGAGAAGCCCTTTGGGAGTGAAGGGTCTCTCTCTTGTCAGGAACTCACGGCCAATGTCCTCAGATCTTTCACTCAAGCTATTTCTATCATAAACTCTTCTTCTGCAGATGAGGTGGCTCATCGGAGTCTCCTGAATTCCGGCCAAAATGGGTCGCCGGTGGCCGTTTCCGGCGAGAACAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGAAGGAAAAGTGCGGTGTCATGGTCCATACTCTCATGCACCACGGATGATAATCATGTATGGAGGAAGTATGGACAAAAGGGAGTTCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGTGGTCATAAGTATGATCAAGGTTGCCTTGCAAAAAAACAGGTGCAGCGGGATCAAGAGAATTCAAATATGTACCGAACTACCTACATTGGAATTCACACATGCAATGCCACCACCAAGGCTACATATTCTGCCACAGATCTTCTGAATTCTGATCATGACTCCGAGGTACCTAATGTTCAGGATCACCACATTAGCCCTCCAAGCTTAAATATAAAACAAACATTTCCCAAAGAAAACACACCAAGTGATGTTACAGATCACATGTTGAATCCTAGCATGTGGTCAGTTTTGAAGGATTTTGAACCATCCAATAAGCCTACCATTGTGCCCTTAATGATGGAAACTGATACTAATAATGTAGATAATGTGTATTCATCTCAACGTCTGGACATGGATTTTCGGGTGCCATCTGTTCATTTTGGCACTGATTTTCCCTTTGACGAAGGTCACTTTCTAATTTAA 912 0.4243 MNNTLCPESEISISAKKNRMIMKELVKGQESATQLKVLLEKPFGSEGSLSCQELTANVLRSFTQAISIINSSSADEVAHRSLLNSGQNGSPVAVSGENRSQKGGRGRYNRRKSAVSWSILSCTTDDNHVWRKYGQKGVLNSEFPRSYFRCGHKYDQGCLAKKQVQRDQENSNMYRTTYIGIHTCNATTKATYSATDLLNSDHDSEVPNVQDHHISPPSLNIKQTFPKENTPSDVTDHMLNPSMWSVLKDFEPSNKPTIVPLMMETDTNNVDNVYSSQRLDMDFRVPSVHFGTDFPFDEGHFLI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1566 303 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 288 IPR044810 GO:0003700
Gso14g1566 303 Gene3D WRKY domain 109 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1566 303 ProSiteProfiles WRKY domain profile. 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1566 303 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 4 288 - -
Gso14g1566 303 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1566 303 MobiDBLite consensus disorder prediction 84 109 - -
Gso14g1566 303 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1566 303 SUPERFAMILY WRKY DNA-binding domain 122 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1566 Gso-Chr14 47507318 47512144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1566 17 231 WRKY Transcription Factor Family AT3G56400 38.222 1.36e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g1566 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1566 - - gmx:100796599 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1566 14 47507318 47512144 Gso4g1870 4 48967997 48970561 PCT
Gso4g1870 4 48967997 48970561 Gso14g1566 14 47507318 47512144 PCT