Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1565 ATGAATAACATCATTTGTGCTGAAAGTGAAAGTGAAATTAGTATCTCAGCCAAAAATAAAAGAATGATAATGAAAGAACTTGTTAAGGGTCAGGAATCTGCTACTCAACTCAAGGTTCTTCTTGAGAAGCCCTTTGGGAGTGAAGGGTCTCTCTCTTGTCAGGAACTCACGGCCAATGTCCTCAGATCTTTCACTCAAGCTATTTCTATCATAAACTCTTCTTCTGCAGATGAGGTGGCTCATCGGAGTCTCCTGAATTCCGGCCAAAATGGGTCGCCGGTGGCCGTTTCCGGCGAGAACAGATCCCAAAAGGGTCGGAGAGGTCGCTACAATAGAAGGAAGAATGCACTTACATGGACCATACTCTCATGCACCACTGATGATAATCATGCATGGAGGAAGTATGGACAAAAGAGAATCCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCAGTCACAAGTATGATCAAGGTTGCCGAGCAATCAAACAGGTGCAGGTGGATCAAGAGAATCCGAATATGTTGCAAACTACTTACATTGGAATTCACACATGCAATGGCACCCCTATGGCTACACATTCAGCCATAGGTTCTAGTTCTACTGAATGGGAATCATCATATCTTCTGAATTTTGATCATCATGACTCCAAGGTACCAAATGTACAAGATCACCACATTAGCTCACCAAACCTAACTATAAAACAAGAATTTCCCAAAGAAGACACCCATAGTGATGTTGCAGATCATAAGTACTCGGATCCTAACTTGTGGTCAGATCTAAAGGATTTTCAACCATTCAAGCCTACCATTATGCCCTTCAGGATGGAATCTGATAATAATAATAATAATAATACTAATGCAGATAATGTGTATTCTTCATGTACAGACTATCAACGTCTGAACATGAATTTTGAGATGGCATCTGTTCATTTTGACACTGACTTCCACTTTGACGAAAGTCACTTTGACGAAAGTCCGTTGCTTTAA 990 0.4081 MNNIICAESESEISISAKNKRMIMKELVKGQESATQLKVLLEKPFGSEGSLSCQELTANVLRSFTQAISIINSSSADEVAHRSLLNSGQNGSPVAVSGENRSQKGRRGRYNRRKNALTWTILSCTTDDNHAWRKYGQKRILNSEFPRSYFRCSHKYDQGCRAIKQVQVDQENPNMLQTTYIGIHTCNGTPMATHSAIGSSSTEWESSYLLNFDHHDSKVPNVQDHHISSPNLTIKQEFPKEDTHSDVADHKYSDPNLWSDLKDFQPFKPTIMPFRMESDNNNNNNTNADNVYSSCTDYQRLNMNFEMASVHFDTDFHFDESHFDESPLL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1565 329 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1565 329 Gene3D WRKY domain 111 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1565 329 Pfam WRKY DNA -binding domain 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1565 329 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 308 IPR044810 GO:0003700
Gso14g1565 329 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 6 308 - -
Gso14g1565 329 MobiDBLite consensus disorder prediction 86 110 - -
Gso14g1565 329 ProSiteProfiles WRKY domain profile. 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1565 329 SUPERFAMILY WRKY DNA-binding domain 123 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1565 Gso-Chr14 47497054 47500806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1565 20 237 WRKY Transcription Factor Family AT3G56400 39.912 4.37e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g1565 WRKY 9.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1565 - - gmx:100796071 635.565