Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1563 ATGCCGAATCCCGACGGTCGCCACCGCAGCCAGCACCAACAACCCCCCTCCAGGTCCCGGGCCCGGCCCTCCTCGTCAACCGCGGCCCGCCCCCCGGCCCGGGCCCGCGTGTCCCTCCGGCAGCTGCTGCGCGTGGCCTCGGTGGCGAGCGGCATCCAGTTCGGGTGGGCCCTGCAGCTGTCTCTGCTGACTCCCTACGTCCAGCAGCTGGGGATCCCCCACCAATGGGCCAGCATCATCTGGCTCTGCGGCCCGGTCTCCGGCCTCTTCGTGCAGCCCCTCGTCGGCCACATGAGCGACCGCTGCACCAGCCGCTTCGGCCGCCGCAGGCCCTTCATCCTCGTCGGCTCCGTCGCCATCGTCGTCGCCGTCCTCGTCATCGCCTTCGCCGCCGACATCGGCTGGCTCCTCGGCGACACCGACGCCTACCGCCCCGCCGCCATCACCGTCTTCATCGTTGGCTTCTGGATCCTCGACGTCGCCAACAACGTCACGCAGGGCCCCTGTCGTGCCTTGCTCGGTGATCTCACTAGCAAGGATCCTCGAAGGACACGTGTTGCAAATGCTTATTACTCACTGTTTATGGCCATTGGTAACATTCTTGGCTATGCAACTGGATCATATAGTGGTTGGTACAAGATTTTTACTTTTGCCCTTTCCCCTGCTTGCACAATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGCGGTCACAACATATATCAGCATCATGGCAGCTCATGAAGTGCCTCTAAATTCAAGTGAGGCAGCCCATGCTGAAGCAGGGGCAGGGGAGTCAGGTAGTGCAGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAAATATTTTACAACCCCTGTATGGATAATTCTGTCTGTTACTGCTCTGGCATGGATTGGGTGGTTCCCATTTACTCTCTTTGATACTGATTGGATGGGTCGAGAGATTTATGGTGGCGATCCAAATCAAGGCCTTGTTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGCATTAACATCATTGTTCATGGAGAGTCTATGCAGGAAGAGGGGAGCTGGTTTTGTATGGGGAATCTCAAATATCATGATGACCATTTGCTTTCTTGCAATGTTAGTAGTAACCTATGTGGCAAATAACATGGGCTATATAGGCAAAGCTTTACCACCAACTGGCATTGTGATAGCTGCATTGATTATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTATAGTGTTCCATATGCCTTAATTTCCACACATATTGAGTCATTGGGACTCGGCCAAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGGTCCCACAGATAATAGTGTCACTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCCCCAGCCTTTGCTGTGGCAGCTGTTTCAGCCCTTATCAGTGGACTCATAGCTGTGTTGGCTATTCCTCGATCTGGTGCTCAAAAGGCTCGAAGCCATGTATGA 1539 0.5289 MPNPDGRHRSQHQQPPSRSRARPSSSTAARPPARARVSLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDRCTSRFGRRRPFILVGSVAIVVAVLVIAFAADIGWLLGDTDAYRPAAITVFIVGFWILDVANNVTQGPCRALLGDLTSKDPRRTRVANAYYSLFMAIGNILGYATGSYSGWYKIFTFALSPACTISCANLKSAFFLDIAFIAVTTYISIMAAHEVPLNSSEAAHAEAGAGESGSAEEAFMWELFGTFKYFTTPVWIILSVTALAWIGWFPFTLFDTDWMGREIYGGDPNQGLVYDTGVRMGALGLLLNSVVLALTSLFMESLCRKRGAGFVWGISNIMMTICFLAMLVVTYVANNMGYIGKALPPTGIVIAALIIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFGGGNSPAFAVAAVSALISGLIAVLAIPRSGAQKARSHV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1563 512 Gene3D MFS general substrate transporter like domains 36 500 IPR036259 -
Gso14g1563 512 PANTHER SUGAR TRANSPORTER 15 510 - -
Gso14g1563 512 MobiDBLite consensus disorder prediction 1 26 - -
Gso14g1563 512 TIGRFAM GPH_sucrose: sucrose/H+ symporter 37 503 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso14g1563 512 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 15 510 - -
Gso14g1563 512 MobiDBLite consensus disorder prediction 1 33 - -
Gso14g1563 512 Pfam MFS/sugar transport protein 57 439 - -
Gso14g1563 512 CDD MFS_SLC45_SUC 42 498 - -
Gso14g1563 512 SUPERFAMILY MFS general substrate transporter 40 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1563 Gso-Chr14 47467229 47474793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1563 3 507 Sucrose Transporter Gene Family AT1G09960 68.369 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1563 K15378 - gmx:100820483 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1563 14 47467229 47474793 Gso2g1861 2 42803880 42809567 GST