Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1559 ATGTCCAAGCCACTGCTAGGCATAGGGGAGGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGTCATCATGGAAAGTGTGTGCCTGAATAGCTCAAAATTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAAAGCAATCTGAACCTTAAGGCTACTGAGCTGAGACTGGGGCTTCCGGGATTGCAGTCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCAATTCAGTTTGATGAAAAACCACTGTTTCCTTTGCATCCTGCTACTGATGATCACCATTCCTCATCAAAGCCTGCTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCTGAGGTCAACACAATATTGTCACCAAGGCCTTCTTCTAATGTGGCATTGAAACCAAGCTCTATGCTTGAGAATGTTGGGGCTCAGCAATCCAAAGCCAAAGAACTCGCAACAGCGAAGGTTGGTCTTGAGAGGTCTCATGTTTTCAATGATAGCAGAACAAATCTGAATGATTCTGCTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAATTCACTGGCCACTACTACAAAGAATGTTGAAGAAGTGGATGGAAAAGCGGGGTCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCTCCTTATTTAAGAAAAGTAGACTTGAAGAATTACTCTGCGTATGCCGAACTATCTTCTGCGCTGGAGAACATGTTCAGCTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACGTACAAGGATAAAGATGGCGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTATTGAGACATGCAAGAGGCTAAGGATCATGAAGAGCTCCGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGTAAGAGAAGGAACTAG 1104 0.4466 MSKPLLGIGEEEGQSNVTLLVSSSVIMESVCLNSSKLKERNYMGLSDCSSVDSSAPSFSDETKSNLNLKATELRLGLPGLQSPERDSDLCLRSSIQFDEKPLFPLHPATDDHHSSSKPAVLGNKRGFSDVMSGFAEEKLLVSSEVNTILSPRPSSNVALKPSSMLENVGAQQSKAKELATAKVGLERSHVFNDSRTNLNDSANNNSSAPATKAQVVGWPPIRSFRKNSLATTTKNVEEVDGKAGSGALFVKVSMDGAPYLRKVDLKNYSAYAELSSALENMFSCFTIGSCGSHGNLGGEVLNETKLKDLLHGSEYVLTYKDKDGDWMLVGDVPWEMFIETCKRLRIMKSSEAIGLAPRAVEKSKRRN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1559 367 Pfam AUX/IAA family 71 358 IPR033389 -
Gso14g1559 367 ProSiteProfiles PB1 domain profile. 247 349 IPR000270 GO:0005515
Gso14g1559 367 PANTHER AUXIN-INDUCED PROTEIN 23 361 - -
Gso14g1559 367 Gene3D - 242 361 - -
Gso14g1559 367 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 361 IPR003311 GO:0005634|GO:0006355
Gso14g1559 367 SUPERFAMILY CAD & PB1 domains 245 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1559 Gso-Chr14 47352194 47356228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1559 250 358 B3 DNA Binding Superfamily AT1G59750 29.358 3.01e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso14g1559 AUX_IAA 8.9e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1559 K14484 - gmx:100815447 704.901