Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1555 ATGGATTCTCGCGACTCCTCCCCTTGCTCCCGCGACCCCGACGCCGCCGACAACCACCACCACCACCGCCGCCCTTCCTTCGACGACGCCCCTCCCAAGGTCAAGCTCATGTGCAGCTTCGGCGGCCGCATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCTCCGTCGACCGCCACGTCAAGTTCCCCTCCCTCATCGCCAAGCTTTCCTCCCTCGCCAACAACGCCCTCTCCAACCATTCCTTCTTCAAGTACCAGCTCCCCGGCGAAGACCTTGACGCCTTAATCTCCGTCACCAACGACGACGACCTCCACCACATGATGATCGAGTACGATCGCCTCTCCCGCTCCTCATCTAGACCTGCGCGCCTCCGCCTCTTCCTCTTCCCCCTCCACAACAACAACAACAACAATTTCGCTCCAACCGAATTGAAATCCGAGCGCCAGTGGTTCGTCGACGCTCTCAATTCCGTTCACGTTCCAGAAGATTCTCCGGCTCCGCCGCCGACGGCGAATCCGGATTTTCTGTTCGGCCTCGAGAAGCCACCGGCGGAGGATGCTCCGGCGAAGGATTCGGAGTGTTTTCCCGAGGATCGTGAAGCCGAACCTGAGATTCAGAATGAGAATAACAATGAGCAACGGAAAATGAAGACAGAGGAAGATAATGATAACGGTAGGGTTTACGGTGTTAACGGCGGGGACTGTTTTGTTCAGAAGAACGCGGAGAAAGTGACGCCGTTAGTGGCGCATTCGCATGCACACACACACGCGCAATTCGTTCATCCTGGTTCGGTTACTGGAACTGGAACAGGAACGGTGTCGTTTATGCAGGAGAGGAGTAATAACGCGGGTTATTCGTTGGCGGTTCCTACTACGGGGAATGAGATTTATCTCATTCACACGCCTTCTGGAGTGTTTCAAGCGGTTCGGCCCGTGACTGGACCGGTTGGGCAGCCGGTTTATCTGGTTCACGCGCCCGGTCCGGTTTCGCATTCGGAGCTTGGAGCGCCGGTGGGACGCGGCGGCGCGCGGTGGTGA 1065 0.5831 MDSRDSSPCSRDPDAADNHHHHRRPSFDDAPPKVKLMCSFGGRIQPRPHDNHLTYVAGDTKILSVDRHVKFPSLIAKLSSLANNALSNHSFFKYQLPGEDLDALISVTNDDDLHHMMIEYDRLSRSSSRPARLRLFLFPLHNNNNNNFAPTELKSERQWFVDALNSVHVPEDSPAPPPTANPDFLFGLEKPPAEDAPAKDSECFPEDREAEPEIQNENNNEQRKMKTEEDNDNGRVYGVNGGDCFVQKNAEKVTPLVAHSHAHTHAQFVHPGSVTGTGTGTVSFMQERSNNAGYSLAVPTTGNEIYLIHTPSGVFQAVRPVTGPVGQPVYLVHAPGPVSHSELGAPVGRGGARW* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1555 354 MobiDBLite consensus disorder prediction 170 235 - -
Gso14g1555 354 Pfam PB1 domain 50 139 IPR000270 GO:0005515
Gso14g1555 354 SMART PB1_new 48 140 IPR000270 GO:0005515
Gso14g1555 354 MobiDBLite consensus disorder prediction 1 30 - -
Gso14g1555 354 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 2 330 - -
Gso14g1555 354 CDD PB1_UP2 37 138 - -
Gso14g1555 354 PANTHER OS05G0427100 PROTEIN-RELATED 2 330 - -
Gso14g1555 354 SUPERFAMILY CAD & PB1 domains 49 147 - -
Gso14g1555 354 Coils Coil 211 231 - -
Gso14g1555 354 Gene3D - 54 139 - -
Gso14g1555 354 MobiDBLite consensus disorder prediction 193 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1555 Gso-Chr14 47229333 47230783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1555 28 167 MAP Kinase Kinase Kinase AT5G57610 42.958 1.56e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1555 - - gmx:100792391 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1555 14 47229333 47230783 Gso2g1852 2 42601506 42602585 GST