Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1540 ATGAGCGAAGAAGAGAACAAGGGTTGTGCTTTTCTGGGAACCAACTCCACCTATTCAGGTTTTCTTCTTGACCCTGAAAAATGTGGTATGCTGAGTTTGCCAGACAAACAAAGACTAGTCCATGAGATTGCTCGGCAGTCAAAAGATGCCTCAAGTATGCTTCAGTCATTTACACGTAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCCAACTCGCACATCAATGGAAATATGCCCTCTCAATCTCCTGCCAAAAGTTGCATTGGAACTAAAAGGAAAAAAAAACCTGCATCTCAGGATTTACATCACGCTCCTCTAGGGAATAGTAAAGAAAAAACAGTGAAAACCTTTTTGTGTCAAAATGTTGCATGCAAAGCTACATTGAATCCTGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATCATTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGTTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTAGCATTTTGAAGGGTAGTTGTGGTATTAAGTTGGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAATTAATGAACTGATGAAGACATGGTGGAAGCAATTATTAGTTGCCAAAGAAGCAAGAAGAACGGATATACTCTCTTTGCGAATATCCCTGGCCCACAGAATTCTTGTAGGAACAGAAGTCTACAAGGAAGTGCAGAAAATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCTAGTATGACTCGTGGAATTGTGAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGCTCTTCTGCTCTTGAATGTTTTGATTCAAAGTTTTCTGGTCTTTTCTCTATTTGTGTGGAAAACAAAGATGCACCAACATGTTCCATTCATTTTGAAGAGTGTCTTCCTACTTCAGTTGTTATTGTGCTCGAGTACAAAGACAAACTTTTAAAGAATTTTCTAGGCTGCAGACTTTGGCACCGAATATCAACAATAGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCCGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATCTTGGGTGCTGCAGAAGCTAAATGGGTGACACCTTGTGAACCCTCCAACCCTTTAAAAGTTATCAGTGGCGGTGGGAATCGCTTTAGATGGTCCCCTCAAAGACCCTCAGGTACAGGAGTGGACATGTGTACACAGGACCGAATAACTGCTGAAATTCATCCCACAGAATCTGCCAACTCCGACATGAAGTTATCAACTGGAGAACATCCTGGGAAGAAACACATCATTCTGAACATCAGGAGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAACCAGTAGAGCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCTTCCACGCCTTCCAAGTCCTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGGAAGCGCTCGAAGGAGAACGATTACGAGTATTCCGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGATGAAATCTTCAGAGTAAGATTTCTCACTTGGTTCAGCCTGAAGGCTAATCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGCGACGAGATATGTTGCGAGCAAAAATCTTAG 1884 0.4151 MSEEENKGCAFLGTNSTYSGFLLDPEKCGMLSLPDKQRLVHEIARQSKDASSMLQSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNSHINGNMPSQSPAKSCIGTKRKKKPASQDLHHAPLGNSKEKTVKTFLCQNVACKATLNPEDSFCKRCSCCICHHYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSSILKGSCGIKLDGAFCCVSCGKINELMKTWWKQLLVAKEARRTDILSLRISLAHRILVGTEVYKEVQKIVETALKLLENEVGSLDHVYASMTRGIVSRLSCGAEVQRLCSSALECFDSKFSGLFSICVENKDAPTCSIHFEECLPTSVVIVLEYKDKLLKNFLGCRLWHRISTIDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCEPSNPLKVISGGGNRFRWSPQRPSGTGVDMCTQDRITAEIHPTESANSDMKLSTGEHPGKKHIILNIRSRFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHQGHIDEIFRVRFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKS* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1540 627 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Gso14g1540 627 PANTHER OS08G0220600 PROTEIN 14 627 - -
Gso14g1540 627 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 627 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1540 Gso-Chr14 46953962 46959087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1540 30 621 PHD Gene Family AT5G57380 33.169 4.51e-97 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1540 - - gmx:100785502 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1540 14 46953962 46959087 Gso2g1829 2 42244824 42249968 GST