Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1535 ATGCACAGCGCCGAAGCAGTGCGTCTTCTGGGGATCGCCGAGAAGCTCCTCCAGAACCGCGATCTCATGGGCTCGCGCGAGTTCGCCATCCTGGCTCAGGAAACCGAGCCTCTCCTTGAAGCCTCCGACCAGATCATGGCCATCGTCGACGTCCTCCTTGCCGCCGACAAGCGCGTCAACAGCCACCCTGACTGGTACGCCGTCCTCCAGCTCGACCGCCGCTCCGACGACCTCGACCTCATCAAGAAACAGTACCGCCGCCTCGCCCTCCTCCTCCACCCCGACAAGTCCCGCTTTCACCTCGCCGGCCACGCCTTCAAGCTCGTCGCCGATGCCTGGACCCTCTTATCCGACCCCATCAAGAAATCCGTTTATGACAAGGACCTCACTTTCTTCTCCCGCGTCGATTTGTCCGTTCCCGAATGGGTCCAGCAGCAGGAGAAGCTCCCCGTCCGGAGGCCTGGGCCTGGGCCCAGCGCCGGCCGCAACAGCGCTGCGGCACGCGAGGACATTCTCGCGGACGAGAATTCGAGGAGGAGGCGGAGGAGGAGGAAAAGGAGCTCTACTTTCTGGACCGCGTGTCCTTATTGTTATCGTTTGTATGAGTACCCTAGGGTTTACGAGGGTTATTGCTTGCGGTGCCAGAATTGTGATAGATCCTTTCACGGCGTCACGGTTCCGTCGCTGCCGCCGCTTGTTCCGGGACAGGAGGCTTATTATTGCTGTTGGGGGTTCTTCCCCGTGGGGTTTGTTGTTGGCGGCTTCGGTTCTCCGCCGGAAAAAGAAGCTGCTCCAGTGGCGGCGAAGCCGGTGCAGGCACCACCTCCTCCGCCACAACAGGCTTCTTCGCTGCCGAATTGGATGCCGGTGCCGGCTGAGAATGGCGCTGGGAGTGTTACTCCGGTGGCGACGGCGAGGGTGACAAGCTCGGGGGCGGCGATGACGAACGGGGTTGGATCGGGGACAGGGCCGAAGAAACGGGGGAGGCCGAGAAAGTATCCATTGCCGTCGTGA 1014 0.6183 MHSAEAVRLLGIAEKLLQNRDLMGSREFAILAQETEPLLEASDQIMAIVDVLLAADKRVNSHPDWYAVLQLDRRSDDLDLIKKQYRRLALLLHPDKSRFHLAGHAFKLVADAWTLLSDPIKKSVYDKDLTFFSRVDLSVPEWVQQQEKLPVRRPGPGPSAGRNSAAAREDILADENSRRRRRRRKRSSTFWTACPYCYRLYEYPRVYEGYCLRCQNCDRSFHGVTVPSLPPLVPGQEAYYCCWGFFPVGFVVGGFGSPPEKEAAPVAAKPVQAPPPPPQQASSLPNWMPVPAENGAGSVTPVATARVTSSGAAMTNGVGSGTGPKKRGRPRKYPLPS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1535 337 Gene3D DnaJ domain 53 136 IPR036869 -
Gso14g1535 337 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 332 - -
Gso14g1535 337 Pfam DnaJ domain 64 126 IPR001623 -
Gso14g1535 337 MobiDBLite consensus disorder prediction 301 317 - -
Gso14g1535 337 SUPERFAMILY Chaperone J-domain 57 129 IPR036869 -
Gso14g1535 337 SMART dnaj_3 63 121 IPR001623 -
Gso14g1535 337 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 332 - -
Gso14g1535 337 ProSiteProfiles dnaJ domain profile. 64 129 IPR001623 -
Gso14g1535 337 CDD DnaJ 64 118 IPR001623 -
Gso14g1535 337 MobiDBLite consensus disorder prediction 269 284 - -
Gso14g1535 337 PRINTS DnaJ domain signature 66 84 IPR001623 -
Gso14g1535 337 PRINTS DnaJ domain signature 85 100 IPR001623 -
Gso14g1535 337 PRINTS DnaJ domain signature 101 121 IPR001623 -
Gso14g1535 337 MobiDBLite consensus disorder prediction 261 337 - -
Gso14g1535 337 MobiDBLite consensus disorder prediction 148 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1535 Gso-Chr14 46854069 46856743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1535 4 335 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.740 1.20e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1535 - - gmx:100783370 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1535 14 46854069 46856743 Gso2g1822 2 42134494 42136173 GST
Gso14g1535 14 46854069 46856743 Gso4g0801 4 8283813 8285016 PCT