Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1534 ATGGTCCCGTTTCGGAGATTCTACGGCTTCGAGCGCTGGCTGGACCACCACGCTGCCCACTCTCCGATGGAGTTGAACGCTGCCAGATCCAAAACGGAGCGGAAATCAACGGAAGCGTGCAAGAGTCACAGGGAAGCTGAGAGGAGACGCAGGCAGAGAATCAACTCTCACCTCTCCACCTTACGTTCCCTCCTTCCTAACGCCGCCAAGTCGGACAAGGCGTCGTTGCTGGGGGAAGTGGTGGAGCACGTGAAGCGGCTGAGGAAGCAGGCCGATGACGTGGCGCGCGGGGACTCGTCGTCCTCCTCGAGAAGCGCTCAGCCGGGTTCGGTCCGGTCGGAGGCGTGGCCGTTTCCGGGAGAGTGCGACGAGGCGACGGTGAGTTTCTGCGACGGCGGCGAACCGAAACGGGTGAAGGCGACGGTGTGCTGCGAGGACCGGGCCGGTCTGAACCGGGATGTGGGGCAGGTGATCCGGTCGGTTCGGGCAAAACCGGTTCGCGCGGAGACGATGACGGTTGGGGGAAGAACGAAGAGTGTTGTGGTGGTGGAGTGGGAAAAGGAAGAGGAGGTTGGGGCGCTGGAACGGGCTTTGAGGGCTGTGGTGGAGAATCGGGCTTTGGTGGGCTTTGGAATGGGCCAAGTCTTTGTGGGCCAGAAACGGGGTAGGGATTGTTGTGAGGTCGACTCTGACTTCTTGCTGAGGAATGGGAGCTTCTGCTAA 723 0.6141 MVPFRRFYGFERWLDHHAAHSPMELNAARSKTERKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLGEVVEHVKRLRKQADDVARGDSSSSSRSAQPGSVRSEAWPFPGECDEATVSFCDGGEPKRVKATVCCEDRAGLNRDVGQVIRSVRAKPVRAETMTVGGRTKSVVVVEWEKEEEVGALERALRAVVENRALVGFGMGQVFVGQKRGRDCCEVDSDFLLRNGSFC* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1534 240 MobiDBLite consensus disorder prediction 90 117 - -
Gso14g1534 240 MobiDBLite consensus disorder prediction 27 50 - -
Gso14g1534 240 PANTHER OS09G0463900 PROTEIN 16 223 - -
Gso14g1534 240 SUPERFAMILY ACT-like 138 203 IPR045865 -
Gso14g1534 240 MobiDBLite consensus disorder prediction 25 50 - -
Gso14g1534 240 Gene3D - 31 95 IPR036638 GO:0046983
Gso14g1534 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 96 IPR036638 GO:0046983
Gso14g1534 240 MobiDBLite consensus disorder prediction 96 110 - -
Gso14g1534 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 38 87 IPR011598 GO:0046983
Gso14g1534 240 PANTHER TRANSCRIPTION FACTOR BHLH30 16 223 IPR045847 GO:0003700|GO:0006355
Gso14g1534 240 Pfam Helix-loop-helix DNA-binding domain 40 87 IPR011598 GO:0046983
Gso14g1534 240 SMART finulus 44 93 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1534 Gso-Chr14 46842203 46843525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1534 28 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.489 2.94e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso14g1534 HLH 6.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1534 - - gmx:100782838 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1534 14 46842203 46843525 Gso2g1820 2 42107463 42108960 GST