Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1531 ATGTTCTCAAAGCTACACTCACAACAGCCTCAACCTTTTCAATTCTCTCGGGAATGTCAATCCTCTAAAGAGGATGACATCCCAAGTACTTGTGGTCTCAATTTGATCACCGTCCAAAAATCTGGTTTGAGCGGTGATCAAAATAATGAGACCACAAGTGAAATAATGCGGCGCCCGAGAGGACGCCCATCCGGATCCAAAAACAGGCCCAAGCCGCCTCTCATAATAACGTGCGAGCCCGAGCCCGTCATGAGCCCGTTCATTCTAGAAATCCCGGGCGGAAGCGGCGTCGTTGAGGCCCTAGCCCGCTTCAGCCGCAGAAAGAACACCGGCCTTTGCGTTTTAACCGGTTCCGGAACCGTGGCCAACGTCACTCTCCGTCAACCTTCTTTCACTCCTGCCGGCGCCTCTGTCGCCACCGTCACTTTCCATGGCCGCTTCAATATCCTCTCCATGTCCGCCACCTTCCTCCACCACGGTTCTCCGGCGGCGATTCCGAACGCCCTCGCCGTGTCCCTTTCCGGACCGCAGGGGCAGATCGTCGGCGGACTCGTCGCCGGGAGGCTCCTCGCCGCGGGCACGGTGTTTGTGATTGCCGCGTCGTTCAACAACCCGTCGTATCACCGGCTTTCGTCGGAGGAGGACGCGCAGAACACCTCTGGTGGCGGCGGTGACGGGCAGTCTCCGGCCGAGTCTAGTATGTACAGCTGTCACCGTCCTTCGGATGTGATTTGGGCTCCAACCCCTAGACCACCTTTCTGA 762 0.5787 MFSKLHSQQPQPFQFSRECQSSKEDDIPSTCGLNLITVQKSGLSGDQNNETTSEIMRRPRGRPSGSKNRPKPPLIITCEPEPVMSPFILEIPGGSGVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFTPAGASVATVTFHGRFNILSMSATFLHHGSPAAIPNALAVSLSGPQGQIVGGLVAGRLLAAGTVFVIAASFNNPSYHRLSSEEDAQNTSGGGGDGQSPAESSMYSCHRPSDVIWAPTPRPPF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1531 253 MobiDBLite consensus disorder prediction 209 235 - -
Gso14g1531 253 ProSiteProfiles PPC domain profile profile. 81 223 IPR005175 -
Gso14g1531 253 MobiDBLite consensus disorder prediction 42 73 - -
Gso14g1531 253 CDD DUF296 86 202 IPR005175 -
Gso14g1531 253 Gene3D - 85 219 - -
Gso14g1531 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 204 IPR005175 -
Gso14g1531 253 MobiDBLite consensus disorder prediction 209 253 - -
Gso14g1531 253 MobiDBLite consensus disorder prediction 1 26 - -
Gso14g1531 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 251 IPR014476 GO:0003680
Gso14g1531 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 251 - -
Gso14g1531 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 215 - -
Gso14g1531 253 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1531 Gso-Chr14 46810312 46811505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1531 49 252 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 54.585 4.92e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1531 - - gmx:100806014 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1531 14 46810312 46811505 Gso2g1817 2 42084478 42085750 GST
Gso14g1531 14 46810312 46811505 Gso4g1868 4 48942579 48944253 PCT