Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1520 ATGGCACCCAGTTTTGATTGCGTTTCGAGCCTTCTCTGTGCCGAAGACAACAGTATTTTTGACGAAAACGATTATGGGGGTTCGGTGGAGGTTTTGGAGGACGCGTGGCAGGATCCTAGATATCGTCGAAACCTTAGTCAAAGTGAGAACTTGGATGTCCCAAATGGGTTTTTTCCATTGCAGAGTGATGAGTGTTTGAGACTGATGGTGGAGAAGGAATGGGATCACTTGCCTAATGGTGATTATGTGAATAGGCTGAGGAGTGGGGATTTGGATTTTGGGGCCAGAAAAGAGGCCATTGATTGGATTGAAAAGGTTCAACAGCACTTTGGTTTTGGACCCCTCTGTGCATATCTATCCATAAACTACTTGGACCGTTTCCTTTCTGCATATGAATTACCACACAGAGCTTGGACAATGCAATTGTTGGCTGTGGGGTGCTTATCTCTGGCAGCCAAAATGGAAGAGACTGATGTCCCGTTCTCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAGGCTAAAACAATACAGAGAATGGAGCTTCTGGTGCTGAGCACATTGAGATGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACCATTTCCTTTACAAGATCAATGATGATCAAAGTCCAATTGGAGCTTCAATTTTGCAATCCATCCAGCTTATACTGAGCACTGTAAGAGGAATTGACTTCTTAGAATTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTGCACACTGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTGGAAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGGCATCAAATAGTGGTGGTTCTGCCAAGGGTGCTAGTGCTTCTGTTTCTGTCCCTAGCGTGCCCGAAAGCCCACTAGGGGTGTTGGTCACTGCATGCTTCAGCTACAAAAGTGATGACACAAATGCTGCTTCATATGCAAATTCTTCACATAACATTAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTTTGGATAA 1065 0.4441 MAPSFDCVSSLLCAEDNSIFDENDYGGSVEVLEDAWQDPRYRRNLSQSENLDVPNGFFPLQSDECLRLMVEKEWDHLPNGDYVNRLRSGDLDFGARKEAIDWIEKVQQHFGFGPLCAYLSINYLDRFLSAYELPHRAWTMQLLAVGCLSLAAKMEETDVPFSLDLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVHTEKAISVLIQLVEKERVLKCVKMIQELASNSGGSAKGASASVSVPSVPESPLGVLVTACFSYKSDDTNAASYANSSHNISPDAKRRKLNKTFG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1520 354 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 348 - -
Gso14g1520 354 MobiDBLite consensus disorder prediction 333 354 - -
Gso14g1520 354 Pfam Cyclin, C-terminal domain 197 297 IPR004367 -
Gso14g1520 354 Pfam Cyclin, N-terminal domain 66 194 IPR006671 -
Gso14g1520 354 SMART Cyclin_C_2 197 312 IPR004367 -
Gso14g1520 354 SMART cyclin_7 101 188 IPR013763 -
Gso14g1520 354 CDD CYCLIN 96 187 IPR013763 -
Gso14g1520 354 Gene3D - 79 195 - -
Gso14g1520 354 PANTHER CYCLINS 1 348 IPR039361 -
Gso14g1520 354 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Gso14g1520 354 Gene3D - 67 283 - -
Gso14g1520 354 SUPERFAMILY Cyclin-like 179 290 IPR036915 -
Gso14g1520 354 SUPERFAMILY Cyclin-like 58 194 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1520 Gso-Chr14 46666472 46669470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1520 55 332 Core Cell Cycle Gene Families AT2G22490 48.797 1.17e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1520 K18810 - gmx:100803873 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1520 14 46666472 46669470 Gso2g1809 2 41932191 41935113 GST