Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1515 ATGGAATTCGACGAGCAAGAGGAGCATGAGGAGGAGGAAATGGTGATGCCGGAGCCGGCGGCGGTATCGGCGCCGCCGAGTTACGACTCGCTCGGGAACTCCGGGGCGATGTCGAAACTTGGCGGCGGCGAGGGGCGGAAGACCGCGCTCGGCGCCGAGGCGGCGGCGGTGCGGTACCGAGAATGCCAGAAGAACCACGCCGTGAGCTTCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTCATGGCGGCCGGAGAGGACGGCACGCTGGAGGCCGTCATCTGCGCTGCCTGCAACTGCCACCGGAATTTCCACCGCAAGGAGATCGACGGCGAGATTACCTCCTTCCACTACCGTGCACAGCCTCCCCCGCCGCCGATGCACCACCACCACCAATTCTCCCCGTACTACCACCACCGCGTCCCGCAGCACCCCGCCGCCGCTGGCTACCTCCACCACCACCTCACACCTCCGATGTCGCAGCACCGCCCGCTCGCCCTCCCGGCCGCAGCCTCCGGCGGCGGCCTAAGCCGCGAAGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGTGGCGGCGGCGGTGGATCCAAAAAACGGTTCCGAACGAAGTTCACGCAGGAACAAAAGGATAAGATGCTCGCATTCGCGGAACAACTAGGGTGGAGAATCCAGAAGCACGATGAATCTGCTGTGGAACAGTTCTGTGCTGAGACCAATGTGAAGCGAAACGTTCTCAAAGTTTGGATGCACAATAACAAGAGCACTCTTGGTAAGAAACCCTAA 789 0.6286 MEFDEQEEHEEEEMVMPEPAAVSAPPSYDSLGNSGAMSKLGGGEGRKTALGAEAAAVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGTLEAVICAACNCHRNFHRKEIDGEITSFHYRAQPPPPPMHHHHQFSPYYHHRVPQHPAAAGYLHHHLTPPMSQHRPLALPAAASGGGLSREEEDMSNPSSSGGGGGGGGSKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVEQFCAETNVKRNVLKVWMHNNKSTLGKKP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1515 262 Gene3D - 184 259 - -
Gso14g1515 262 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Gso14g1515 262 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Gso14g1515 262 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 48 261 - -
Gso14g1515 262 MobiDBLite consensus disorder prediction 154 201 - -
Gso14g1515 262 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Gso14g1515 262 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 261 - -
Gso14g1515 262 SUPERFAMILY Homeodomain-like 186 260 IPR009057 -
Gso14g1515 262 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 199 255 IPR006455 -
Gso14g1515 262 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1515 Gso-Chr14 46556961 46558272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1515 1 258 ZF-HD Transcription Factor Family AT4G24660 52.326 5.09e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gso14g1515 ZF-HD_dimer 6.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1515 - - gmx:100776421 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1515 14 46556961 46558272 Gso2g1805 2 41848502 41850651 GST
Gso14g1515 14 46556961 46558272 Gso4g0794 4 8193056 8194871 PCT
Gso14g1515 14 46556961 46558272 Gso6g0799 6 7560235 7561439 PCT
Gso4g0794 4 8193056 8194871 Gso14g1515 14 46556961 46558272 PCT
Gso6g0799 6 7560235 7561439 Gso14g1515 14 46556961 46558272 PCT