Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso14g1515
ATGGAATTCGACGAGCAAGAGGAGCATGAGGAGGAGGAAATGGTGATGCCGGAGCCGGCGGCGGTATCGGCGCCGCCGAGTTACGACTCGCTCGGGAACTCCGGGGCGATGTCGAAACTTGGCGGCGGCGAGGGGCGGAAGACCGCGCTCGGCGCCGAGGCGGCGGCGGTGCGGTACCGAGAATGCCAGAAGAACCACGCCGTGAGCTTCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTCATGGCGGCCGGAGAGGACGGCACGCTGGAGGCCGTCATCTGCGCTGCCTGCAACTGCCACCGGAATTTCCACCGCAAGGAGATCGACGGCGAGATTACCTCCTTCCACTACCGTGCACAGCCTCCCCCGCCGCCGATGCACCACCACCACCAATTCTCCCCGTACTACCACCACCGCGTCCCGCAGCACCCCGCCGCCGCTGGCTACCTCCACCACCACCTCACACCTCCGATGTCGCAGCACCGCCCGCTCGCCCTCCCGGCCGCAGCCTCCGGCGGCGGCCTAAGCCGCGAAGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGTGGCGGCGGCGGTGGATCCAAAAAACGGTTCCGAACGAAGTTCACGCAGGAACAAAAGGATAAGATGCTCGCATTCGCGGAACAACTAGGGTGGAGAATCCAGAAGCACGATGAATCTGCTGTGGAACAGTTCTGTGCTGAGACCAATGTGAAGCGAAACGTTCTCAAAGTTTGGATGCACAATAACAAGAGCACTCTTGGTAAGAAACCCTAA
789
0.6286
MEFDEQEEHEEEEMVMPEPAAVSAPPSYDSLGNSGAMSKLGGGEGRKTALGAEAAAVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGTLEAVICAACNCHRNFHRKEIDGEITSFHYRAQPPPPPMHHHHQFSPYYHHRVPQHPAAAGYLHHHLTPPMSQHRPLALPAAASGGGLSREEEDMSNPSSSGGGGGGGGSKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVEQFCAETNVKRNVLKVWMHNNKSTLGKKP*
263
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso14g1515
262
Gene3D
-
184
259
-
-
Gso14g1515
262
TIGRFAM
ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain
58
109
IPR006456
-
Gso14g1515
262
ProSiteProfiles
Zinc-finger ZF-HD dimerization-type profile.
59
108
IPR006456
-
Gso14g1515
262
PANTHER
ZINC-FINGER HOMEODOMAIN PROTEIN 1
48
261
-
-
Gso14g1515
262
MobiDBLite
consensus disorder prediction
154
201
-
-
Gso14g1515
262
Pfam
ZF-HD protein dimerisation region
57
109
IPR006456
-
Gso14g1515
262
PANTHER
ZINC-FINGER HOMEODOMAIN PROTEIN 2
48
261
-
-
Gso14g1515
262
SUPERFAMILY
Homeodomain-like
186
260
IPR009057
-
Gso14g1515
262
TIGRFAM
homeo_ZF_HD: homeobox domain, ZF-HD class
199
255
IPR006455
-
Gso14g1515
262
MobiDBLite
consensus disorder prediction
1
45
-
-
Showing 1 to 10 of 10 entries
Previous
1
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Gso14g1515
Gso-Chr14
46556961
46558272
Dispersed/Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso14g1515
1
258
ZF-HD Transcription Factor Family
AT4G24660
52.326
5.09e-72
218
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Transcription factors information
Show
10
25
50
100
entries
Search:
Select
Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
zf-HD
Gso14g1515
ZF-HD_dimer
6.7e-28
No_clan
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso14g1515
-
-
gmx:100776421
484.182
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Event-related genes
Show
10
25
50
100
entries
Search:
Select
Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso14g1515
14
46556961
46558272
Gso2g1805
2
41848502
41850651
GST
Gso14g1515
14
46556961
46558272
Gso4g0794
4
8193056
8194871
PCT
Gso14g1515
14
46556961
46558272
Gso6g0799
6
7560235
7561439
PCT
Gso4g0794
4
8193056
8194871
Gso14g1515
14
46556961
46558272
PCT
Gso6g0799
6
7560235
7561439
Gso14g1515
14
46556961
46558272
PCT
Showing 1 to 5 of 5 entries
Previous
1
Next
Select All
Download Selected Rows