Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1509 ATGAAAATGAAAAAGAAACGAAAGGAAAGTGAGGCCAGTGGACGGTCGTCGAACTTGCCGGAGATTTCGAAGTCGCATCACTCGCTGGAGCGGCGTTCGCGGCTGAACAAGCGGTGCAGGGAAGATCGCGGCGTGGCGACGGTGCCGCCTTCACGCGGCGCGTCGTTACTCTTGACGCCGTCGCGCGGCTTGAAGCGGAAGATAGGGTGCATCGACAAGGCCACGCAGATGGGAAGGAGCATGAGGATCGAGGACGATTACGTGACCGGGGGCAGCGCGATCGGGCAGGGGAAGTTCGGGTCGGTGACGGTGTGCCGCGCACGTGCGAACGGCGCGGAGCACGCGTGCAAGACGCTGAGGAAGGGGGAGGAGACGGTGCACAGGGAGGTGGAGATAATGCAGCACGTGTCGGGGCACCCTGGGGTGGTGACGCTGGAGGCTGTGTATGAGGATGATGAGCGTTGGCACCTTGTGATGGAGTTGTGTTCTGGAGGGAGGTTGGTTGATAGGATGAAGGAGGGGCCGTGCTCGGAGCACGTGGCGGCGGGGGTACTGAAGGAAGTGATGTTGGTGGTTAAGTATTGCCATGATATGGGTGTCGTGCATAGGGATATTAAGCCTGAGAATGTTTTGCTCACCGGGTCCGGGAAGATCAAGCTCGCGGATTTCGGGCTCGCCATCAGGATTTCTGAGGGTCAGAATTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTCGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTGGTCTTCCATTTAAAGGAGGTTCACCGGAAGCAGTTTTTGAGGAAATTAAGAATGTCAAACTAGATTTTCAAACAGGGGTGTGGGAATCAATTTCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATGTTTCAGCAAGGATAGCAGCTGATGAAGTACTAAGGCATCCATGGATATTGTTCTACACTGAGCGCACATTAAAGATGTTGCCCTTTAAATCAAAATTGAAACTCCAAAATGCAGCTGCTTCTGCAACTGAATCTGGGTTAGGAGGAAACAAGATAGATGATGATGGTTCCCTTGATGAGGATTATTCAAGCCCATTTTCATCCTCTGAAAGTTGCAATTCAGAGAATCATGAGGACTGTGTGTGGATTGATGCACTTTCCACTGCAGTTTCACGTGTGAGGATATCCGAAACAAAGAGGACCAAGTTGTGGGGTCCCACAACCACAAGTCCACTTGATCAGCAAGGTTCATCTAACATGAAGACTAACCTCTGTAAAGCATTCTGA 1344 0.5193 MKMKKKRKESEASGRSSNLPEISKSHHSLERRSRLNKRCREDRGVATVPPSRGASLLLTPSRGLKRKIGCIDKATQMGRSMRIEDDYVTGGSAIGQGKFGSVTVCRARANGAEHACKTLRKGEETVHREVEIMQHVSGHPGVVTLEAVYEDDERWHLVMELCSGGRLVDRMKEGPCSEHVAAGVLKEVMLVVKYCHDMGVVHRDIKPENVLLTGSGKIKLADFGLAIRISEGQNLTGVAGSPAYVAPEVLSGRYSEKVDIWSSGVLLHALLVGGLPFKGGSPEAVFEEIKNVKLDFQTGVWESISKPARDLVGRMLTRDVSARIAADEVLRHPWILFYTERTLKMLPFKSKLKLQNAAASATESGLGGNKIDDDGSLDEDYSSPFSSSESCNSENHEDCVWIDALSTAVSRVRISETKRTKLWGPTTTSPLDQQGSSNMKTNLCKAF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1509 447 SMART serkin_6 88 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1509 447 Gene3D Transferase(Phosphotransferase) domain 1 168 369 - -
Gso14g1509 447 MobiDBLite consensus disorder prediction 24 45 - -
Gso14g1509 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Gso14g1509 447 SUPERFAMILY Protein kinase-like (PK-like) 84 354 IPR011009 -
Gso14g1509 447 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 18 439 - -
Gso14g1509 447 ProSiteProfiles Protein kinase domain profile. 88 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1509 447 Pfam Protein kinase domain 92 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1509 447 Gene3D Phosphorylase Kinase; domain 1 91 167 - -
Gso14g1509 447 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 439 - -
Gso14g1509 447 CDD STKc_CAMK 91 334 - -
Gso14g1509 447 MobiDBLite consensus disorder prediction 1 54 - -
Gso14g1509 447 MobiDBLite consensus disorder prediction 363 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1509 Gso-Chr14 46417634 46420944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1509 72 335 EF-hand Containing Proteins AT4G04720 42.545 2.17e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso14g1509 Pkinase 6.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1509 - - gmx:100801753 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1509 14 46417634 46420944 Gso2g1800 2 41792095 41795353 GST
Gso14g1509 14 46417634 46420944 Gso4g0825 4 8744417 8747692 PCT
Gso14g1509 14 46417634 46420944 Gso6g0832 6 7922461 7927045 PCT
Gso4g0825 4 8744417 8747692 Gso14g1509 14 46417634 46420944 PCT
Gso6g0832 6 7922461 7927045 Gso14g1509 14 46417634 46420944 PCT