Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1498 ATGAGCATGCAAAAGGAGAGTCCTCTTATTAGACTCCACAGTTTCGACCAAGGCCATGCATGGCTAGCTCTACTGCACCTTCTCATTCACATCTCACCGGCAGTAACCGGTCAGCCGGTAACCCCGCCGGTGCAACCCGACAGCAACAAATCCGTGATCGCCATCATGGCCATCGTGGTCATCATGTTCCTCATCTCAGCCTTCCTCTCCCTCTACTCCCGCAAGTGCTCCGACCGGCCGGTCCAGACACGTGGCATCCTCGACCTCGCGGGCCCCACGGGCGCAGCCGGTAACCCGTTGCAAGCCGAATCCAACGGCCTCAATCAAGCCACCATAGAAACGTTCCCAACTTTCCTCTACGCCGACGTGAAGGGTCTCAAGATTGGAAAAGACACGCTTGCATGCGCGGTGTGCTTGAACGAGTTCGAAGACAACGACACCCTCCGCATGATCCCCAAATGCTGCCACGTGTACCACCCCGATTGCATTGGTGCGTGGTTAGCCTCTCATTCCACGTGCCCGGTGTGTCGTGCCAACCTTGTTCCACAACCAGAAGACATGAACACGAACACGAACACGAACATGCCTTCAATCTTGTCCATTCAGATACCCAATGAAGAAGAACGTGAACATGAACATGAACATGAATACGAGGCTGTTATTGTTGGTGAGGAACATAAGAGAGATGTTGACGTGGAGTCACCGAAGGTGGATTTACTTCGGAGGATTCGAACGTTGCACCATGATCATCAGAGCCGTCCATCGAGGTCGAAGTCGACGGGGTTCTTGTCTTCGCTCTTGTTTCCGAGATCAAACTCGATGGGGCAATTGGCGCAGCATGCTGGGGAGAACTATGAGAGGTTTACGCTAAGGTTACCCGAGGAGGTACTACGGAGCCAGATGGTGCTGAAGCGTGCGAATAGCTGCGTGTGCTTTACGAGGATGAGTAGTGGCACGTGGGGGTATAGGACGAGAAGCGTGGGGAGAGGGTGTGTGCAGTACGAGAGGTTTGGTGGTGAGAATGAACAGTGGGGTTTCACTTTGACGCCGCCAAGTCTCGTTAGGAACAGTTGGAATAATAATAGATCAACGAGAAAATCACCGGTTCAGCGTTCGGGTGTGGCGTTGGATAATAATAATGCTGGTGAGAGATCCACTGAATTCTTGCGTCTTGGGTAG 1179 0.5293 MSMQKESPLIRLHSFDQGHAWLALLHLLIHISPAVTGQPVTPPVQPDSNKSVIAIMAIVVIMFLISAFLSLYSRKCSDRPVQTRGILDLAGPTGAAGNPLQAESNGLNQATIETFPTFLYADVKGLKIGKDTLACAVCLNEFEDNDTLRMIPKCCHVYHPDCIGAWLASHSTCPVCRANLVPQPEDMNTNTNTNMPSILSIQIPNEEEREHEHEHEYEAVIVGEEHKRDVDVESPKVDLLRRIRTLHHDHQSRPSRSKSTGFLSSLLFPRSNSMGQLAQHAGENYERFTLRLPEEVLRSQMVLKRANSCVCFTRMSSGTWGYRTRSVGRGCVQYERFGGENEQWGFTLTPPSLVRNSWNNNRSTRKSPVQRSGVALDNNNAGERSTEFLRLG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1498 392 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Gso14g1498 392 SMART ring_2 135 176 IPR001841 -
Gso14g1498 392 MobiDBLite consensus disorder prediction 356 379 - -
Gso14g1498 392 PANTHER RING FINGER DOMAIN-CONTAINING 1 330 - -
Gso14g1498 392 Pfam Ring finger domain 134 177 IPR001841 -
Gso14g1498 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 183 IPR013083 -
Gso14g1498 392 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 330 - -
Gso14g1498 392 SUPERFAMILY RING/U-box 129 187 - -
Gso14g1498 392 CDD RING-H2_PA-TM-RING 135 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1498 Gso-Chr14 46249918 46251666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1498 22 390 Rapid Response to Elicitors AT3G05200 34.286 6.46e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1498 K10664 - gmx:100814384 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1498 14 46249918 46251666 Gso2g1794 2 41702460 41704229 GST