Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1496 ATGGCTAGCAAACACAGAAAACTCTTCCCTGATGAAACAGCAACCACAAACCAAACCCAAGATTGCTACGGCTTTTGTGACCCAGCATGCCCTTACAATTGTTACAATAACCCTGATTACTTTTTCTCTCCTCCACCACCGCCACCACCTTCTATTTCACATTCAAGCCAAGTTAACCATATATCTTCCTACTTTATCATTCTTGTTACACTATTCACGGTCATTTTTGTTGTGGTTGGTTTCTACGTGATCAAGGTGAAGTGCTATGCTACATGGTGCGGCTGGCGATTCAGCGGTTCCGTTCCCTCTTCAGACACCACCACTGAGGAGTTTCTCAATGAGAACCAAGTTGACCACCCCGTGTGGCTCATTGCCACTGTGGGGTTGCAACAATCGATCATCAACTCCATCACGGTTTGCAAGTACAAGAAGAATGAAGGGTTGGTTGAAGGAACCGAGTGTTCGGTGTGTTTGAACGAGTTTCAAGAAGAGGAGACATTACGACTCTTGCCAAAGTGCAACCATGCTTTTCACGTTCCTTGTATTGACACTTGGTTGAGATCACACACAAATTGCCCTCTTTGTCGTGCCGGTATTGTTTCTAATAGTGTCAATTCTGAAGCACCAACACCCGTGTCGAATTCGGAGCAAGAAAATGCAAATTTGGGGAGGAATCAAGATACCCTTTTGGACAATTCACGGATTAATGAAGGTGGGTTAAGCAGCAACATGGTTGCTGGGGAATCAAGTGAAGCAATAGATGAATCAAATTCTAAGGATCGGGTAAATGATGAAACTCAGAACAATGGGGTTCTGATGAATATTGAGATTCAAACAGAGATGGGGTCTGTTTCAACTACAGAATGTGAAAGTCATCGTGTTGTTGATGATCATAAACATGATGATGACACAATGTTGCACACGGATAATCTAGGGAAGCAAGATCAAGATGGTGATTACTACTACTCAAAAACGTGTAGAACAGTGCGTCGTTCCTCTATTGAAGAGTGTTTGCATTTAAGCCCAGTATCTATGAAAAGGTCATTCTCCTCTTGCAATGGAAGGACTCTGACTTCGAGAGAATTTTGA 1089 0.4298 MASKHRKLFPDETATTNQTQDCYGFCDPACPYNCYNNPDYFFSPPPPPPPSISHSSQVNHISSYFIILVTLFTVIFVVVGFYVIKVKCYATWCGWRFSGSVPSSDTTTEEFLNENQVDHPVWLIATVGLQQSIINSITVCKYKKNEGLVEGTECSVCLNEFQEEETLRLLPKCNHAFHVPCIDTWLRSHTNCPLCRAGIVSNSVNSEAPTPVSNSEQENANLGRNQDTLLDNSRINEGGLSSNMVAGESSEAIDESNSKDRVNDETQNNGVLMNIEIQTEMGSVSTTECESHRVVDDHKHDDDTMLHTDNLGKQDQDGDYYYSKTCRTVRRSSIEECLHLSPVSMKRSFSSCNGRTLTSREF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1496 362 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 357 - -
Gso14g1496 362 MobiDBLite consensus disorder prediction 206 252 - -
Gso14g1496 362 SMART ring_2 154 195 IPR001841 -
Gso14g1496 362 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 357 IPR044675 -
Gso14g1496 362 ProSiteProfiles Zinc finger RING-type profile. 154 196 IPR001841 -
Gso14g1496 362 Pfam Ring finger domain 153 196 IPR001841 -
Gso14g1496 362 CDD RING-H2_PA-TM-RING 153 196 - -
Gso14g1496 362 MobiDBLite consensus disorder prediction 206 265 - -
Gso14g1496 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 205 IPR013083 -
Gso14g1496 362 SUPERFAMILY RING/U-box 144 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1496 Gso-Chr14 46194193 46196062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1496 4 204 C3H Transcription Factor Family AT1G72220 50.661 4.98e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1496 - - gmx:100813311 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1496 14 46194193 46196062 Gso2g1792 2 41668276 41669888 GST