Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso14g1471 | ATGCAAATCATATCAAAATTTCATTCTTTTTGCCTTGACATGAATCAAAACCAGCTTCAGCCCCTTCCTCTCCTTAGTAGCTTCTTAGGTTCATCTCCTGAAGAATCTTTGCTACAAAACCAAAATGAAAATCCTAATGCATGCCATGCTCAAGTTGAGGATGTTACAGTGGCCTTACACATAGGCCTCCCTGACCATTCAAGTGGCTCCAATTCCACCAATAATCATGGATTTGTGAATGCCACAACTCAAGTTCCTAACAATTACTGGATACCAACTCAGGAGCAGATCCTCATTGGGTTTAGCCATTTCTCTTGTCCTGTGTGCCACAAAACCTTCAACCGCTACAACAACCTTCAGATGCATATGTGGGGACATGGGTCACAGTATCGCAGAGGCCCAGACTCACTGAAACGAACCCATCCACGGCCCTTGTTGGACCTTCCATGCTACTGTTGCGCAAGAGGGTGCAAGAACAACATCGAGCACGCACGTGCCAAGCCTCTGAAGGATTTTCGCACGCTTCAAACACACTACAAGAGGAAGCACGGTTCCAAGCCCTTCACGTGCCGCAAGTGTGGCAAGCCTCTGGCCGTGAAAGGTGACTGGCGAACCCACGAGAAAAACTGTGGCAAACGATGGCTTTGTATCTGTGGTTCTGATTTCAAGCATAAGAGGTCACTTAAAGACCACATAAAAGCCTTTGGATTTGGTCACACCCCTTTTTCTTCTTTTTCTGATGGTATGTAA | 750 | 0.4613 | MQIISKFHSFCLDMNQNQLQPLPLLSSFLGSSPEESLLQNQNENPNACHAQVEDVTVALHIGLPDHSSGSNSTNNHGFVNATTQVPNNYWIPTQEQILIGFSHFSCPVCHKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDLPCYCCARGCKNNIEHARAKPLKDFRTLQTHYKRKHGSKPFTCRKCGKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHTPFSSFSDGM* | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso14g1471 | 249 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 106 | 126 | IPR013087 | - | |
Gso14g1471 | 249 | PANTHER | TESTA 1 PROTEIN, PUTATIVE-RELATED | 17 | 244 | - | - | |
Gso14g1471 | 249 | Gene3D | Classic Zinc Finger | 184 | 240 | - | - | |
Gso14g1471 | 249 | SMART | c2h2final6 | 104 | 126 | IPR013087 | - | |
Gso14g1471 | 249 | SMART | c2h2final6 | 188 | 208 | IPR013087 | - | |
Gso14g1471 | 249 | Gene3D | Classic Zinc Finger | 103 | 126 | - | - | |
Gso14g1471 | 249 | PANTHER | ZINC FINGER PROTEIN WIP2 | 17 | 244 | IPR043584 | GO:0003700|GO:0010468 | |
Gso14g1471 | 249 | SUPERFAMILY | beta-beta-alpha zinc fingers | 99 | 126 | IPR036236 | - | |
Gso14g1471 | 249 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 104 | 131 | IPR013087 | - | |
Gso14g1471 | 249 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 208 | IPR036236 | - | |
Gso14g1471 | 249 | Pfam | Zinc finger, C2H2 type | 104 | 123 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso14g1471 | Gso-Chr14 | 45627416 | 45629843 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso14g1471 | 14 | 244 | C2H2 Transcription Factor Family | AT1G34790 | 57.422 | 2.06e-99 | 290 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Gso14g1471 | zf-C2H2 | 0.00059 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso14g1471 | - | - | gmx:547675 | 511.531 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso14g1471 | 14 | 45627416 | 45629843 | Gso13g0636 | 13 | 20415637 | 20417775 | GST |