Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1470 ATGGCTTACCCGCATTACCGATCACAGTTCGGAGACACAACGTTCACTAAGGTCTTCGTTGGAGGCCTAGCTTGGGAGACTCCAACCGAAGAAATGCGCAAATATTTTGAGCAGTTTGGCGACATTCTTGAAGCTGTCATTATCACTGATAAGAGCACAGGAAAATCTAAAGGCTACGGATTCGTAACATTCCGTGATCCAGAATCAGCTAGAAGGGCATGTGCTGATCCAAACCCAGTTATAGATGGAAGAAGAGCAAATTGTAACATTGCTTCTCTAGGAAGACCTAGACCATCACCACCTAGAGGAAGAGGTACATTCCAAGGAGGAGCACCAGTGACGGCAGCAGCGTCTTACGGTGGAGTGCCGGCGGCTGGGCCGCCGGCACTGGCGCCGCCGCCACCGCCGCTAGTGTACCCGCCATATGGCTACCCTACCTACACCCCTGATTATGGGTACCACCAAGCCTCATTGTATAACCCACAAATTCAGCAACCACAATACTACCACCAACAACTCTACGGACCATCATCTTCCACCATGGGTTCCCCTTATTACTATGGCTATTCTGTGCAAGCACCAAGGGGCACATTCTCTTCAACCCAACCACATCGCATACCAGCTGGACCCTCCTATCTATACTACCCTACACCCATGGAAAGCTCTTTCTCTGCTTATCGTCCACCACCTCAATTGCAACAACTTCCAATAAGGCAACCCCCTCCTTCCCCTAGTGATTCACAGACTCAGCAGCGTGCCTCCTCCGAGACAGCAGGAGGAGTAGTTATAACTTCAGAAAGTTCAAATACCCAAGGGAGGAACTGA 825 0.503 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKSTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTFQGGAPVTAAASYGGVPAAGPPALAPPPPPLVYPPYGYPTYTPDYGYHQASLYNPQIQQPQYYHQQLYGPSSSTMGSPYYYGYSVQAPRGTFSSTQPHRIPAGPSYLYYPTPMESSFSAYRPPPQLQQLPIRQPPPSPSDSQTQQRASSETAGGVVITSESSNTQGRN* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1470 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Gso14g1470 274 MobiDBLite consensus disorder prediction 244 274 - -
Gso14g1470 274 SUPERFAMILY RNA-binding domain, RBD 9 111 IPR035979 GO:0003676
Gso14g1470 274 PANTHER GEO13361P1-RELATED 1 264 - -
Gso14g1470 274 PANTHER - 1 264 - -
Gso14g1470 274 SMART rrm1_1 17 89 IPR000504 GO:0003723
Gso14g1470 274 Gene3D - 3 111 IPR012677 -
Gso14g1470 274 MobiDBLite consensus disorder prediction 223 274 - -
Gso14g1470 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Gso14g1470 274 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1470 Gso-Chr14 45598110 45603807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1470 12 92 C2H2 Transcription Factor Family AT2G19380 39.506 6.72e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1470 K25006 - gmx:100788516 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1470 14 45598110 45603807 Gso13g0634 13 20398299 20403791 GST
Gso14g1470 14 45598110 45603807 Gso4g0863 4 9245681 9250480 PCT
Gso14g1470 14 45598110 45603807 Gso6g0858 6 8155639 8160418 PCT
Gso4g0863 4 9245681 9250480 Gso14g1470 14 45598110 45603807 PCT
Gso6g0858 6 8155639 8160418 Gso14g1470 14 45598110 45603807 PCT