Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1463 ATGATGGCTGATTCACTATCGGTTAATTTTGATTCTTCAATCAAGTCTGAATTCTCCACCGAACAAGCACACAAAACTACCCATGAGGCTAAACACTCTCCATCTAACATCCAAAAGGCTATTGCTGAGGTTGTTGGTACATACATTCTTATATTTGCAGGATGTGGAGCTGCTCTTGTAAATGAGAAGTTGCCCCTTACAATAGTAGGCATAGCAATGGTTTCGGGTCTAGGTCTAACGGTGGCTACATATTCTGTTGGCCATGTCTCTGGTGGCCATTTCAATCCTGCAGTCACAATTGCTTTGGCTGCTGTCAGAAAAGTTCAATTTAAACTTGTGCCTATTTATGTGTTGTGCCAGATGATGGGTGCTACACTGGCCCCTCTCACCCTCAAAGTGTTGTATCATGACAAGGCGGATATTGGAGTAACAGTGACTAAATACTTGAGCTCAACTTCTGATCTAGAAGCAATAGTGTGGGAATTCATCACCACATCCATACTAATGCTCACCATTCGCGGTGTTGCCACTGATCACAGAGGGAGCAAAGATCTCACTGGAGTTGCAATAGGCATTTCAGTTCTGATTAACGTCATCATTGCCGGGCCTATTACTGGAGCTTCAATGAATCCAGCAAGGAGTTTAGGTCCAGCTATTGTATCTGGTGATTACAAAAACATTTGGGTTTATATCATAAGCCCAATTCTTGGTGCAGTCTCAGCAAGTACACTTTACAAATTCCTAGAAGTAAACAAACCAGTTAAACCCGAACCATGCCATTGTAACATATGCAATCATAATCATTTACCTTTCTAA 816 0.4179 MMADSLSVNFDSSIKSEFSTEQAHKTTHEAKHSPSNIQKAIAEVVGTYILIFAGCGAALVNEKLPLTIVGIAMVSGLGLTVATYSVGHVSGGHFNPAVTIALAAVRKVQFKLVPIYVLCQMMGATLAPLTLKVLYHDKADIGVTVTKYLSSTSDLEAIVWEFITTSILMLTIRGVATDHRGSKDLTGVAIGISVLINVIIAGPITGASMNPARSLGPAIVSGDYKNIWVYIISPILGAVSASTLYKFLEVNKPVKPEPCHCNICNHNHLPF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1463 271 TIGRFAM MIP: MIP family channel proteins 42 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PANTHER MAJOR INTRINSIC PROTEIN 2 269 - -
Gso14g1463 271 Pfam Major intrinsic protein 33 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 SUPERFAMILY Aquaporin-like 33 251 IPR023271 -
Gso14g1463 271 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso14g1463 271 PANTHER AQUAPORIN NIP2-1 2 269 IPR034294 -
Gso14g1463 271 Gene3D Glycerol uptake facilitator protein. 4 257 IPR023271 -
Gso14g1463 271 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Gso14g1463 271 CDD MIP 38 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1463 Gso-Chr14 45438846 45441259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1463 33 255 Major Intrinsic Protein MIP AT5G37820 46.753 2.20e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1463 K09874 - gmx:100798380 533.872