Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1456 ATGGGTGCTGATGTAAGCACCGATGTAGAAATTACATATTTCTACATCGGTGCTTACTCAGCACCAATGTGGAAACATGCATTTGTTACATCGTTCATGAGTGGTGTTATTCCTTCTAAAATGTCTCAGCTCTCAAAATTAGTCTCGCTTGATCTCTCATTTCTTGGAATGAGAGTTAAAGCAGCAACCCTGGAAAATGTGATTGTAAATGCAACTGATATAAGGGAGCTCACTCTTGATTCCCTAAACATGTATCTTGAAGGTGAACTTCCAGAGTTCAATCGGAGCACTCCTCTTAGATACTTGGATCTCTCTTTCACTGGTTTTCCAGGAAAACTTCCCAATAACATTAACCATTTGGAGTCTCTTAACTATTTGGATTTTCATGCCTCTTACTTTGAAGGACCTATTCCTCTGCTTTTATCTAATCTTACGCAACTAAAATTCTTGGGCCTTGGTGAGAACAATTTCGGCGGTGAGATTCCATCATCACTTTCAAATCTTCACCATCTCATTTACTTGGATCTTTTTTATAGTAATTTTGATGGTGAAAACCCCGATATAATCCGGCATCCAAATATTGTTGAGCTTATTGGGTATTGTGCAGAGCATGGTCAAAGGCTTCTGATTTATGAGTATTGCAGAAATGGGTCGCTGCAGGATGCACTCCATTCACATGATGAATTCAAAACAAGACTGTCATGGAATGCTCGCATTCGGATAGCACTCGGGGCAGCTAGATCCTTAGAGTACTTGCATGAGCAGTTTCAGCCACCAGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTCTATGATGATGTTTCAGTGCGTGTATCTGATTGTGGTTTGTCTCCACTAATAACTAAAGGTTCTGTAAGTCAACTCTCAGGACAACTGCTAACAGCATATGGCTATGGGGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGGTGA 1029 0.4052 MGADVSTDVEITYFYIGAYSAPMWKHAFVTSFMSGVIPSKMSQLSKLVSLDLSFLGMRVKAATLENVIVNATDIRELTLDSLNMYLEGELPEFNRSTPLRYLDLSFTGFPGKLPNNINHLESLNYLDFHASYFEGPIPLLLSNLTQLKFLGLGENNFGGEIPSSLSNLHHLIYLDLFYSNFDGENPDIIRHPNIVELIGYCAEHGQRLLIYEYCRNGSLQDALHSHDEFKTRLSWNARIRIALGAARSLEYLHEQFQPPVVHRNFKSANILLYDDVSVRVSDCGLSPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1456 342 Gene3D Transferase(Phosphotransferase) domain 1 192 342 - -
Gso14g1456 342 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 185 342 - -
Gso14g1456 342 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 97 178 - -
Gso14g1456 342 SUPERFAMILY Protein kinase-like (PK-like) 189 341 IPR011009 -
Gso14g1456 342 Gene3D Ribonuclease Inhibitor 30 134 IPR032675 -
Gso14g1456 342 Pfam Protein tyrosine and serine/threonine kinase 189 341 IPR001245 GO:0004672|GO:0006468
Gso14g1456 342 PANTHER OS01G0253100 PROTEIN 185 342 IPR045271 GO:0004714|GO:0006468
Gso14g1456 342 PANTHER OS01G0253100 PROTEIN 97 178 IPR045271 GO:0004714|GO:0006468
Gso14g1456 342 Gene3D Ribonuclease Inhibitor 135 191 IPR032675 -
Gso14g1456 342 SUPERFAMILY L domain-like 30 197 - -
Gso14g1456 342 ProSiteProfiles Protein kinase domain profile. 117 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1456 Gso-Chr14 45197741 45200766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1456 185 342 Strubbelig Receptor Gene Family AT4G03390 79.114 2.40e-86 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso14g1456 PK_Tyr_Ser-Thr 5.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1456 - - gmx:106795346 311.612