Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1440 ATGACGAACCGTAATGTGAATAACACGCTTATGGAGTTGGCAATGTCGATTTCAAACAGAAGTGCTCTACCTAGAGCTGCGGTGCCTGGACTAATGGCCTTGTTTGGTGGGGTTTTGGGCCCACCCCAGAAGAAGCTCTTAAGGAAAACTTTAGAAGATGGAAGTGTTAATAAAGGAGGGAACAAAGTTATTAACACATGGATTGATTCAATGAGAGCCTCTTCTCCCACTCGATCTGCCAAATCCACACAAAACAACCAAAACCAAGACCCAACAAGTCCTTGGACTCTTTACCACCCTTCGGCACTGAGCATGTTTGATCATATTGTATGTGAGTCCAAAGGGAAGCAGATTGTGACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGATCCAGATAAAGCATACATGAGTAAAAAGATGAGGGCCACATTGAAGGACTTAGCAAGGCATTTCCCCACCGCCATAGTGAGTGGAAGGTGCCTAGACAAGGTGTATAACTTTGTAAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGAATGGACATCAAGGGACCAACAAATAAGCGAAGTACTAAGAAAGGAAACGAACAAGTGCTCTTCCAACCCGCTAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTGGAAAAAACAAAGTCTGTCCCTGGGGCTAAGGTAGAAAATAACAAGTTTTGCTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAACTGGGCATCATTGGGTGAACAAGTGAGTTTGGTGCTCAACGAGTACCCAAAACTTAAGCTAACTCAAGGGAGAAAAGTGCTTGAGATTCGACCAGCCATAAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGCTAGAGTCACTAGGATATGCTAATTCTGATAATGTATTTCCAATCTTTATTGGTGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTGCGGAGGAGGGGCCAAGGGATTGGGATTCTTGTTTCTAAAATTACAAAAGAAACCGATGCTTCCTACACTTTGCAAGATCCAACAGAGGTTGGGCAGTTTTTGAGGCATATGGTAGAGTGGAAAAGAACGAGTTCCCAATACCAGAAGTTAGATTCTAGATGA 1140 0.4333 MTNRNVNNTLMELAMSISNRSALPRAAVPGLMALFGGVLGPPQKKLLRKTLEDGSVNKGGNKVINTWIDSMRASSPTRSAKSTQNNQNQDPTSPWTLYHPSALSMFDHIVCESKGKQIVTFLDYDGTLSPIVADPDKAYMSKKMRATLKDLARHFPTAIVSGRCLDKVYNFVRLAELYYAGSHGMDIKGPTNKRSTKKGNEQVLFQPASEFLPMINEVYNILVEKTKSVPGAKVENNKFCLSVHFRCVDEKNWASLGEQVSLVLNEYPKLKLTQGRKVLEIRPAIKWDKGKALEFLLESLGYANSDNVFPIFIGDDRTDEDAFKVLRRRGQGIGILVSKITKETDASYTLQDPTEVGQFLRHMVEWKRTSSQYQKLDSR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1440 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 376 IPR044651 GO:0004805|GO:0005992
Gso14g1440 379 TIGRFAM T6PP: trehalose-phosphatase 116 364 IPR003337 GO:0003824|GO:0005992
Gso14g1440 379 Gene3D - 224 378 IPR023214 -
Gso14g1440 379 Gene3D - 118 203 IPR023214 -
Gso14g1440 379 SUPERFAMILY HAD-like 121 366 IPR036412 -
Gso14g1440 379 Pfam Trehalose-phosphatase 121 353 IPR003337 GO:0003824|GO:0005992
Gso14g1440 379 CDD HAD_TPP 121 357 - -
Gso14g1440 379 MobiDBLite consensus disorder prediction 74 94 - -
Gso14g1440 379 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 329 IPR006379 -
Gso14g1440 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1440 Gso-Chr14 44820389 44823476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1440 107 361 Trehalose Biosynthesis Gene Families AT1G70290 27.273 3.49e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1440 K01087 - gmx:100785139 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1440 14 44820389 44823476 Gso13g0619 13 20141192 20144181 GST
Gso14g1440 14 44820389 44823476 Gso4g0894 4 9695606 9698451 PCT
Gso14g1440 14 44820389 44823476 Gso6g0883 6 8426108 8429126 PCT
Gso4g0894 4 9695606 9698451 Gso14g1440 14 44820389 44823476 PCT
Gso6g0883 6 8426108 8429126 Gso14g1440 14 44820389 44823476 PCT