Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1438 ATGGCAGCTACGATGAATTTCTACAACGGAACATCACAAGAACAAGTTGAGTCAGATCCATTCAGAGGTGAGCTCATGGAAGTTCTAGAACCTTTTATGAAAACTAGCCCTTCCTCAACAACTCCCTCTATTATTCTCTCTTCAGATTCACCTTCATCTTTTGATTTCCCTTCCTCTTCTTTACTTTCTCCACACCCCAATTTCTACACACACACTCCCCCCCCTTCCTACTTACTCCAAAGCCAACAATCCTTAATAGGCTTTGAGCAACCACCGAGTTCCCTTCTCGGGCTCAACCACCTAAGCCCGTCTCAGATTTCTCAGATCCAGGCCCAGATCGAGGCCCAACAGAGCCAAAACCAGAACCCACACTCTCTCAACTTTCTCGGCCCGAAGCCTGTCCCAATGAAGCACGTGGGCGGGCCTCCGAAGCCCACGAAGCTGTACCGGGGCGTAAGGCAGAGGCATTGGGGGAAGTGGGTGGCGGAGATCAGGCTCCCGAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCTGCTTTGGCTTACGACAAAGCCGCGTATAGGCTCCGAGGCGACTTCGCGAGGCTGAACTTCCCGAGCCTGAAAGGCTCGTGCCCCGGGGAGGAGTACAAGCCTGTGCATTCCGCGGTGGACGCTAAGCTCGACGCGATTTGCGCCAACTTGGCGGAAATGCAGAAGCAAGGGAAGACGGAGAAAGGTGCCAGGTCAGCGAAGAAATCGAAGCAAGGTCCGAACCAGGAGGCCAAGCCCGAACCTCAAGCTTCCGCTGAAAGTGAGGGTTCTGCGGATTCTTCTCCGCTGTCTGATCTTACCTTTGATGTAACCGAGCCGCAATGGGAACATTTTAATTTGCAGAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 933 0.5295 MAATMNFYNGTSQEQVESDPFRGELMEVLEPFMKTSPSSTTPSIILSSDSPSSFDFPSSSLLSPHPNFYTHTPPPSYLLQSQQSLIGFEQPPSSLLGLNHLSPSQISQIQAQIEAQQSQNQNPHSLNFLGPKPVPMKHVGGPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPSLKGSCPGEEYKPVHSAVDAKLDAICANLAEMQKQGKTEKGARSAKKSKQGPNQEAKPEPQASAESEGSADSSPLSDLTFDVTEPQWEHFNLQKFPSYEIDWDSL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1438 310 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 MobiDBLite consensus disorder prediction 259 285 - -
Gso14g1438 310 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 309 - -
Gso14g1438 310 MobiDBLite consensus disorder prediction 241 258 - -
Gso14g1438 310 Pfam AP2 domain 149 197 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 Gene3D AP2/ERF domain 148 206 IPR036955 GO:0003700|GO:0006355
Gso14g1438 310 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 309 - -
Gso14g1438 310 CDD AP2 147 205 IPR001471 GO:0003700|GO:0006355
Gso14g1438 310 SUPERFAMILY DNA-binding domain 148 205 IPR016177 GO:0003677
Gso14g1438 310 MobiDBLite consensus disorder prediction 239 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1438 Gso-Chr14 44783594 44785396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1438 1 310 AP2-EREBP Transcription Factor Family AT1G78080 51.020 2.42e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g1438 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1438 K09286 - gmx:100781774 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1438 14 44783594 44785396 Gso13g0617 13 20089184 20091007 GST
Gso14g1438 14 44783594 44785396 Gso4g0897 4 9744456 9746204 PCT
Gso14g1438 14 44783594 44785396 Gso6g0885 6 8442519 8444202 PCT
Gso4g0897 4 9744456 9746204 Gso14g1438 14 44783594 44785396 PCT
Gso6g0885 6 8442519 8444202 Gso14g1438 14 44783594 44785396 PCT