Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1408 ATGTATATGAACTCTTCATCAACTCAACTAGTCCTCACGAAAAGGATGGGTATATATGATCCATTCCATCAAGTGAACATGTGGGGGGACAGCTTTAAAATTGATGGAAGCTTGAACTCAATTGCTCCCCAAATGTTGATGATTAAGCCTAGCATGCGGAACAAGTCTGAATGTACTCCTCACGAATCAAGGGAACCTTCTGGAGATGATCAAGAGATTAACGACAAAGCTGATACTAAGGCACTAAGACGTCAAGCTCAAAATCGTGAGGCTGCTCGGAAATGTCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCATGCAATTGGAGTTGGAGATTGAGAAAGCAAGAAAGCAGGGTATGTACATACGCCGTGCACTAGATGTCAGTTATATGGGATCATCCGCAACAGTTAACCCAGCAAGGATAACTCTGTTTGAACTTGAATATGGACAATGGATTGAAGAGCAAGATAGACTGAATCAAGAACTGAGAAATGCATTGCAAACTCAAGCATCTGAAATGCAGCTTCATCTACTTGTTGAGAGTTGCTTGAGTCACTACTCAAATCTTTTCAGGATGAAAGCAGAAGCTGCAAAGGCTGATGTCTTCTATTTAATCTCTGGTGCATGGAAAGCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCTCAGCTTCTAAATATCATTGCACCACAACTTGAGCCTTTGACTGATCAACAAATTGTGAGCATTAGCAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCACTTTCACTAGGATTGGGCAAACTCCAGCAGAGTCTGGTCCACAACATACCATCAGATCCATTGGTTGTAGGACACTACGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACTCTGATTCACATGTCTCGGATCCTGACGACTGGGCAAGCTGCTAAAGGCTTGCTGGCTATGGGAGAATACTTTCATCGTCTTCGCACTCTTAGTTCTTTATGGACTGCTCGTTCATGTGATCCTTCCTTTCCGACTCAACTCTCAAACTGA 1119 0.4388 MYMNSSSTQLVLTKRMGIYDPFHQVNMWGDSFKIDGSLNSIAPQMLMIKPSMRNKSECTPHESREPSGDDQEINDKADTKALRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKARKQGMYIRRALDVSYMGSSATVNPARITLFELEYGQWIEEQDRLNQELRNALQTQASEMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKASVERLFLWIGGSRPSQLLNIIAPQLEPLTDQQIVSISNLRLSSQQAEDALSLGLGKLQQSLVHNIPSDPLVVGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLIHMSRILTTGQAAKGLLAMGEYFHRLRTLSSLWTARSCDPSFPTQLSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1408 372 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 113 IPR004827 GO:0003700|GO:0006355
Gso14g1408 372 Gene3D - 79 133 - -
Gso14g1408 372 Pfam Seed dormancy control 169 242 IPR025422 GO:0006351|GO:0043565
Gso14g1408 372 SUPERFAMILY Leucine zipper domain 80 121 IPR046347 GO:0003700|GO:0006355
Gso14g1408 372 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Gso14g1408 372 Coils Coil 99 126 - -
Gso14g1408 372 PANTHER TRANSCRIPTION FACTOR TGA9 16 364 - -
Gso14g1408 372 Pfam bZIP transcription factor 78 114 IPR004827 GO:0003700|GO:0006355
Gso14g1408 372 MobiDBLite consensus disorder prediction 55 74 - -
Gso14g1408 372 MobiDBLite consensus disorder prediction 53 74 - -
Gso14g1408 372 PANTHER FACTOR TGA7, PUTATIVE-RELATED 16 364 - -
Gso14g1408 372 Coils Coil 161 181 - -
Gso14g1408 372 ProSiteProfiles DOG1 domain profile. 150 360 IPR025422 GO:0006351|GO:0043565
Gso14g1408 372 SMART brlzneu 76 136 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1408 Gso-Chr14 43670060 43675608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1408 1 365 Calmodulin-binding Proteins AT1G77920 53.298 7.19e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso14g1408 DOG1 6.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1408 K14431 - gmx:100775882 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1408 14 43670060 43675608 Gso13g0595 13 19594823 19600156 GST
Gso14g1408 14 43670060 43675608 Gso6g0905 6 8683561 8688464 PCT
Gso6g0905 6 8683561 8688464 Gso14g1408 14 43670060 43675608 PCT