Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1396 ATGAACCACCTACCGCGAATATTCGGCAATAGAAAGAAGCAAGCCTCCGACATGGACCCGACAAAGAAGAAGAAGAGTAAGAGTAAGAAGCATCAGCAGCCGAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCGTTGTGCTCGTCGCGCGATGAGTACGACGCCTCGACGTCGTCGTCGTCGTCGTTGCACTGCACGCGCTCGATGGAGCTCTTCGATCGCAAGAGCTTCCGAATCGAGGGCGTGGAGGGCGAGTTCGACCAGATTTGCCGCAGCCTCGGCCTCTCCGGTCCCGAGGACTTCTCCATTCCGGCCGCCGCCTGGGAGGCCATGAAGCTCCGTTGCTCCTCGGACCTACTTCCTCGCCGCCCGAAGCACGGCGGCGAGGAAGAGCAATTCGACGAAGAGCCGAAGGAGAAGGAGAAAGAGGAAGTGGAAATTGCAGTATTAGAGAGCGAGGATCGAGCTAGGGTTTTGGATGAATGTGTTGTTCCTGCTGAGAGCAGTGGTTGCTGTGGTGGAATTAAGGGTTTTCGGCCTCCGATGTTGAAGCCGCCGCCGGGGGTTAGGGTTTCGGTGGTGGACGACGCCACGTGTTCCACGTGGGATTTGATGCGGGATTTTGCGCCGAAAGGGGAAGGAGGAGGGAAGGATAGTTACGTGGAATTAAATTCTTCTGATGATGAAGATGATCATGAGCGAGAAGAGAAGGAAGAAGAAGAAGAAGAAGAAGGGGAAGTTGGTGGAGTGAGAGTGGAGAGTGTAGAAGAGGAAAATGCGGCGGCGATTGCGGAGATTGTGGGTGATTTTTCAGGGTTTTCTACTTCGAATGAAGATGATTCTTCTAGCACTACCACTGGACCTAGGTCTAATAATATATCTCCCAATGGGAGAATCAAGCGTGTTATTACCGCGGGTAACTGGCAGAAGGGTGAGCTTTTGGGGCGAGGTTCCTTTGGTTCTGTTTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTACTTGATCAGGGGAATCAGGGAAGGCAAAGTGTATATCAACTGGAACAGGAGATTGCACTTTTGAGTCAATTTGAACATGAGAATATAGTTCAATACATTGGCACCGAAATGGATGCATCAAATCTGTATATCTTTATTGAGCTTGTAACCAAAGGTTCCCTTCGAAACCTCTACCAGAGATATAATCTTCGAGATTCTCAAGTATCTGCCTATACAAGACAGATTTTGCATGGTTTAAAGTATCTTCATGACCGAAATATTGTTCACAGGGATATCAAATGTGCAAATATATTGGTGGATGCAAACGGATCTGTTAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTCAATGATGTTAAGTCCTGCAAGGGAACAGCATTCTGGATGGCCCCTGAGGTTGTAAAAGGGAAAAACACAGGTTATGGGCTTCCTGCTGATATATGGAGTCTGGGATGTACTGTGTTGGAGATGTTAACGGGCCAAATTCCATACTCTCACTTAGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCTCCTCATGTGCCTGATTCTCTTTCAAGAGATGCACGGGATTTTATTCTGCAGTGTCTAAAAGTTGATCCAGATGAACGCCCCAGTGCTGCTCAACTCTTAAACCATACCTTTGTCCAAAGGCCACTGCATTCCCAGTCTTCTGGTTCTGCATCTCCTTATATTAGAAGGGGTTAA 1761 0.4815 MNHLPRIFGNRKKQASDMDPTKKKKSKSKKHQQPKLERRNAAKHFEYDAGSLCSSRDEYDASTSSSSSLHCTRSMELFDRKSFRIEGVEGEFDQICRSLGLSGPEDFSIPAAAWEAMKLRCSSDLLPRRPKHGGEEEQFDEEPKEKEKEEVEIAVLESEDRARVLDECVVPAESSGCCGGIKGFRPPMLKPPPGVRVSVVDDATCSTWDLMRDFAPKGEGGGKDSYVELNSSDDEDDHEREEKEEEEEEEGEVGGVRVESVEEENAAAIAEIVGDFSGFSTSNEDDSSSTTTGPRSNNISPNGRIKRVITAGNWQKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGNQGRQSVYQLEQEIALLSQFEHENIVQYIGTEMDASNLYIFIELVTKGSLRNLYQRYNLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVKGKNTGYGLPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGRGEPPHVPDSLSRDARDFILQCLKVDPDERPSAAQLLNHTFVQRPLHSQSSGSASPYIRRG* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1396 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Gso14g1396 586 Gene3D Transferase(Phosphotransferase) domain 1 311 582 - -
Gso14g1396 586 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Gso14g1396 586 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 580 - -
Gso14g1396 586 ProSiteProfiles Protein kinase domain profile. 314 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1396 586 MobiDBLite consensus disorder prediction 214 260 - -
Gso14g1396 586 SMART serkin_6 314 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1396 586 MobiDBLite consensus disorder prediction 1 43 - -
Gso14g1396 586 SUPERFAMILY Protein kinase-like (PK-like) 301 573 IPR011009 -
Gso14g1396 586 MobiDBLite consensus disorder prediction 230 253 - -
Gso14g1396 586 MobiDBLite consensus disorder prediction 125 148 - -
Gso14g1396 586 MobiDBLite consensus disorder prediction 277 302 - -
Gso14g1396 586 Coils Coil 229 249 - -
Gso14g1396 586 Pfam Protein kinase domain 315 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1396 586 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1396 Gso-Chr14 43314657 43325022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1396 181 571 MAP Kinase Kinase Kinase AT4G08500 61.480 6.60e-150 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso14g1396 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1396 K13414 - gmx:100819177 1022.31