Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1395 ATGGATCTGAGGAACCTCTTGCGCCGCAATGCGGCAAAACTCTTCGAGTCGTCGTCGTCCTCCTCCTCGTCAACCGGCTCCTCCCGGTCGTTAGTCTACACGCGCGCGATGGAGTTTTACGACCAAGCGGATATCCGATTCGAGGGAGTGGAGGCCGAGTTAAACCAGCTTTGCCAGAGCCTGGGGCTCTCCAGCATTGAGGATTTCTCCATTCCGGCCGCGGACTGGGAGGCCATTAAGCTCCGCTCCTCGTTGGACCTCCTGCCACCGCCGCGGAGGCCGAATCGAGGCGGCGGTGGGGAGTTCGATGACGAGGTGAACGAGAAACAGAAAGAGGAAATTGGAGTATTGGAGAGCGAGGATCCAGCTAGAGTTTTGGATGAATGTGTTGTTCCTGCTGAGAGCAGTGGTTGCTGTGGTGGAATTAAGGGTTTTCGGCCTCCGGTGGTGGACGACGCCACGTGTTCCACGTCGGATTTGATGCGGGATTTTGCGCCGAAAGGGGAAGGAGGAGGGAAGGATAGTTACGTGGAATTAAATTCTTCCGATGATGAAGATGATCATGAGCGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGAAGTTGGTGGAGTGAGAGTGGAGAGTGTAGAAGAGGAAAATGCGGCAACGATTGCGGAGATTGTGGGTGATTTTTCAGGGTTTTCTACTTCGAATGAAGATGATTCTTCTGGCACTACCACTGGACCTAGGTCTAATAATATATCTCCCAATGGGAGAATCAAGCGTGTTATTACCGCGGGTAACTGGCAGAAGGGTGAGTTTTTGGGGCGAGGTTCGTTAGGTTCTGTTTATGAAGCGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTACTTGAACAGCGGAATCCGCGAATGCAAAGTGTATATCAACTGGTGGAACAGGAGATTGCACTTTTGAGTCAATTTGAACATGAGAATATAGTTCAATACATTGGCACCGAAATGGATGCATCAAATCTGTATATCTTTATTGAGCTTGTAACCAAAGGTTCCCTTCGAAACCTCTACCAGAGATATTATCTTCGAGAATCTCAAGTATCTGCCTATACAAGACAGATTTTGCATGGTTTAAAGTATCTTCATGACCGAAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAACGGGTCTGTTAAGCTTGCAGATTTTGGATTGGCAAGGGCAACCAAAAAATTGAATGATGTTAAGTCCTGCAAGGGAACAGCATTCTGGGTGGCCCCTGAGGTTGTAAACGGGAAAAACACAGGTTATGGGCTTCCTGCTGATATATGGAGTCTGGGATGTACTGTGTTGGAGATGTTAACGGGCGAAAATCCATACTCTCCCTTAGAATCTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCTCCTCATGTGCCTGATTCTCTTTCAAGAGATGCACGGGATTTTATTCTGCAGTGTCTAAAAGTTGATCCAGATGAACGCCCCAGTGCTGCTCAACTCTTAAACCATACCTTTGTCCAAAGGCCACTGCATTCCCAGTCTTCTGGTTCTGCATCTCCTTATATTAGAAGGGGTTAA 1632 0.4694 MDLRNLLRRNAAKLFESSSSSSSSTGSSRSLVYTRAMEFYDQADIRFEGVEAELNQLCQSLGLSSIEDFSIPAADWEAIKLRSSLDLLPPPRRPNRGGGGEFDDEVNEKQKEEIGVLESEDPARVLDECVVPAESSGCCGGIKGFRPPVVDDATCSTSDLMRDFAPKGEGGGKDSYVELNSSDDEDDHEREEEEEEEEEEEEEEEGEVGGVRVESVEEENAATIAEIVGDFSGFSTSNEDDSSGTTTGPRSNNISPNGRIKRVITAGNWQKGEFLGRGSLGSVYEAISEDGFFFAVKEVSLLEQRNPRMQSVYQLVEQEIALLSQFEHENIVQYIGTEMDASNLYIFIELVTKGSLRNLYQRYYLRESQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLADFGLARATKKLNDVKSCKGTAFWVAPEVVNGKNTGYGLPADIWSLGCTVLEMLTGENPYSPLESMQALFRIGRGEPPHVPDSLSRDARDFILQCLKVDPDERPSAAQLLNHTFVQRPLHSQSSGSASPYIRRG* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1395 543 Pfam Protein kinase domain 270 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1395 543 MobiDBLite consensus disorder prediction 164 215 - -
Gso14g1395 543 SUPERFAMILY Protein kinase-like (PK-like) 258 530 IPR011009 -
Gso14g1395 543 SMART serkin_6 269 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1395 543 MobiDBLite consensus disorder prediction 230 257 - -
Gso14g1395 543 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 40 537 - -
Gso14g1395 543 ProSiteProfiles Protein kinase domain profile. 269 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1395 543 MobiDBLite consensus disorder prediction 227 257 - -
Gso14g1395 543 Coils Coil 181 208 - -
Gso14g1395 543 MobiDBLite consensus disorder prediction 180 208 - -
Gso14g1395 543 PRINTS Tyrosine kinase catalytic domain signature 348 361 IPR001245 GO:0004672|GO:0006468
Gso14g1395 543 PRINTS Tyrosine kinase catalytic domain signature 383 401 IPR001245 GO:0004672|GO:0006468
Gso14g1395 543 PRINTS Tyrosine kinase catalytic domain signature 450 472 IPR001245 GO:0004672|GO:0006468
Gso14g1395 543 PRINTS Tyrosine kinase catalytic domain signature 493 515 IPR001245 GO:0004672|GO:0006468
Gso14g1395 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Gso14g1395 543 Gene3D Transferase(Phosphotransferase) domain 1 266 539 - -
Gso14g1395 543 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 40 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1395 Gso-Chr14 43285423 43301831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1395 236 528 MAP Kinase Kinase Kinase AT4G08500 67.687 1.62e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso14g1395 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1395 K13414 - gmx:100798028 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1395 14 43285423 43301831 Gso13g0588 13 19457113 19466583 GST
Gso14g1395 14 43285423 43301831 Gso6g0920 6 8818367 8825957 PCT
Gso6g0920 6 8818367 8825957 Gso14g1395 14 43285423 43301831 PCT