Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1390 ATGGCTGCTAGCACCAAAAACGGCGACGTTAGTGACTGCGGCGGGGACCTCAAGCCCCCTCTCCCGTTGGACTTCTCCAGCGACGAAGACGATGAAAACGACGACGTTTCATATCTGAATGAGTTGATACAAAAAGCGAGAACGGAGATTGAGGACTCGGTTCTGGACCCGCACAACGAGGGAATCCCGGACAAGTGGGTCCCACGGATTGCCTCCCTGGTGCGGCTCACAGGGAAGCACCCCTTCAACGCGGAGCCCCCACTCCCACTCCTCATGCACCACGGCTTCATCACCCCAGCGCCACTCCACTACGTCCGCAACCACGGTCCAGTCCCCAAAGCAAATTGGGAAGACTGGACCGTGGAAGTAACCGGTTTGGTCAAGCGACCAAACCGGTTTAGCATGAAAAACCTTGTGAAGGATTTCCATCACCGCGAGTTTCCCGCCACGCTCGTCTGCTCGGGGAACCGCCGCAAGGAGCTGAACATCATGAAGCCCACCTCCGGCTCCAGCAACACCGCCGGCAGCGCCTCCACCTCCGTGTGGCGCGGCATCCCGCTGCGCCACGTGCTGCGCCGCTGCGGGATCCTCGCACGTGCTAAGGGCGCGCTGCACGTGTGCTTCGAGGGCGCCGAGGATCTCCCCGGCGGCGGAGGGTCCAAGTACGGAACCAGCATCTCCAGGGACCTCGCCATGGACCCCACGCGTGATGTCATCCTCGCATACATGCAAAACGGCGAGCACATTCCGCCGGATCACGGGTTCCCCGTGCGCCTGATTATTCCAGGGTTCATCGGTGGAAGAATGGTGAAGTGGCTCAAACGCATTGTCGTTTGCGAGCATGAGTCCGATAATCATTATCATTACAAGGATAACAAAATGCTCCCTTCTCACGTCGATGCAGATCTTGCCAATGAAGAAGGTTGGTGGTACAAGCAGGAGTATAAGATCAACGAGTTGAGTATAAACTCAGTGATAACTACGCCTTCTCACGAGGAGATCTTGTCCATCAACTCATATACTACGCAGAGGCCTTATGAACTCAGAGGCTACGCATATTCCGGTGCTGGAAGAAAAGTGACTCGTGTTGAGGTAACATTTGATGGTGGAGAAACGTGGCACGTGTGCACATTGGACCATACTGAGAAACCAAACAAATATGGCAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAAGTGGAGGTGATAGACCTGCTTGGGACCAATGAGATTGCTGTTCGAGCTTGGGATGAAGGCCTCAACACCCAGCCTGAACACCTCAATTGGAATCTTATGGGCATGATGAACAACTGCTGGTATAGAGTGAAAACAAATGTGGGCAAGCCTGCCAAGGGTGAGATTGGCATATTGTTTGAACATCCAGCTCAACCAGGAAACCAACCAGGTGGGTGGATGGGAAAGGAAAGACATTTGGAAAAATCACTAGAGAAATTACCAAGCATCAAAAGGAGTGGTTCCACTCCATCCATGAACATAACCTCAAAAAGGTTCTCTATTTCTGAAGTCAAAAAGCACTGCACCTCTGACTCTACTTGGATCATCGTCCATGGCCATGTCTACGACTGCACCCGCTTCCTCAAAGACCACCCCGGTGGCGTTGATAGCATCCTCATAAATGCCGGCACCGACTGCACCGAAGAGTTTGACGCCATCCATTCTGACAAAGCAAGGAGATTGCTCGAAGATTTTCGAATTGGCGAGCTCATGACCACAGACTACACCTCAGACTCAGAGCCTGACAACTCTATGCATGGCGATTCTGAATCCACCCATTTGGCCCCTATCAAGGAGATCACCACACCAAGACCACAACGCAAGGTTGCACTTAACTCACGTGAGAAAATCTCATGCAAGCTTGTGTCGAAGACCTACATTTCCCATAACACGAGGCTCTTTCGTTTTGCGTTGCCCTCGGAGGACCAGCTCTTGGGTTTACCCGTGGGAAAGCACATTTTCTTGTACGCCACCATTGGTGACAAGCTATGCATACGAGCCTACACTCCAACAAGTAGTGTGGACGAAGTGGGGTTCTTTGACCTTCTTATCAAGGTGTACTTCAAAGGCGTGCACCCCAAGTACCCAAATGGAGGACTCATGTCCCAACATTTGGATTCTCTCTCCATTGGGTCTATGTTGGACGTGAAGGGCCCGTTGGGCCACATAGAGTACACCGGAAGAGGCAACTTCATGGTTCATGGTAAACAAAAATTTGCAAAGAGACTAGCTATGTTGGCTGGTGGGACCGGGATCACACCCATTTACCAAGTGGCACAAGCAATTTTGAAGGACCCAGAAGACCACACTGAAATGCATCTAGTGTATGCTAACCACGCCGAGGATGATATATTGTTGAGGGAGGAGTTGGATGCGTGGGCAAAGACACATTGTGATCGGTTCAAAGTGTGGTACGTGGTGGGAATTGCAAAGGAAGGGTGGCAATACAGTGTGGGACGCATCACAGAGAGTATTATGAGGGAGCACCTTCCAAAATCATCGAGCGATGCCTTGGCTTTAACGTGTGGGCCACCACCCATGATTGAGTTTGCGGTGCAACCTAACTTGGAGAAGATGGGGTACGATATCAAGAACGACCTGCTTGTGTTTTAG 2628 0.5179 MAASTKNGDVSDCGGDLKPPLPLDFSSDEDDENDDVSYLNELIQKARTEIEDSVLDPHNEGIPDKWVPRIASLVRLTGKHPFNAEPPLPLLMHHGFITPAPLHYVRNHGPVPKANWEDWTVEVTGLVKRPNRFSMKNLVKDFHHREFPATLVCSGNRRKELNIMKPTSGSSNTAGSASTSVWRGIPLRHVLRRCGILARAKGALHVCFEGAEDLPGGGGSKYGTSISRDLAMDPTRDVILAYMQNGEHIPPDHGFPVRLIIPGFIGGRMVKWLKRIVVCEHESDNHYHYKDNKMLPSHVDADLANEEGWWYKQEYKINELSINSVITTPSHEEILSINSYTTQRPYELRGYAYSGAGRKVTRVEVTFDGGETWHVCTLDHTEKPNKYGKYWCWCFWSLEVEVIDLLGTNEIAVRAWDEGLNTQPEHLNWNLMGMMNNCWYRVKTNVGKPAKGEIGILFEHPAQPGNQPGGWMGKERHLEKSLEKLPSIKRSGSTPSMNITSKRFSISEVKKHCTSDSTWIIVHGHVYDCTRFLKDHPGGVDSILINAGTDCTEEFDAIHSDKARRLLEDFRIGELMTTDYTSDSEPDNSMHGDSESTHLAPIKEITTPRPQRKVALNSREKISCKLVSKTYISHNTRLFRFALPSEDQLLGLPVGKHIFLYATIGDKLCIRAYTPTSSVDEVGFFDLLIKVYFKGVHPKYPNGGLMSQHLDSLSIGSMLDVKGPLGHIEYTGRGNFMVHGKQKFAKRLAMLAGGTGITPIYQVAQAILKDPEDHTEMHLVYANHAEDDILLREELDAWAKTHCDRFKVWYVVGIAKEGWQYSVGRITESIMREHLPKSSSDALALTCGPPPMIEFAVQPNLEKMGYDIKNDLLVF* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 535 545 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 671 678 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 749 768 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 775 784 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 787 798 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 819 835 IPR001709 GO:0016491
Gso14g1390 875 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 843 851 IPR001709 GO:0016491
Gso14g1390 875 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 60 317 IPR036374 -
Gso14g1390 875 Pfam Oxidoreductase FAD-binding domain 624 730 IPR008333 -
Gso14g1390 875 SUPERFAMILY Riboflavin synthase domain-like 613 731 IPR017938 -
Gso14g1390 875 Pfam Cytochrome b5-like Heme/Steroid binding domain 507 575 IPR001199 -
Gso14g1390 875 PANTHER NADH-CYTOCHROME B5 REDUCTASE 37 875 IPR001834 GO:0016491
Gso14g1390 875 SMART Cyt_b5_2 504 576 IPR001199 -
Gso14g1390 875 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 125 160 IPR022407 GO:0043546
Gso14g1390 875 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 532 539 IPR018506 GO:0020037
Gso14g1390 875 MobiDBLite consensus disorder prediction 578 604 - -
Gso14g1390 875 Gene3D - 499 586 IPR036400 -
Gso14g1390 875 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 501 576 IPR001199 -
Gso14g1390 875 Pfam Mo-co oxidoreductase dimerisation domain 315 445 IPR005066 GO:0016491|GO:0030151
Gso14g1390 875 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 719 869 IPR039261 -
Gso14g1390 875 SUPERFAMILY E set domains 319 446 IPR014756 -
Gso14g1390 875 Gene3D - 319 493 - -
Gso14g1390 875 Gene3D - 63 312 IPR036374 -
Gso14g1390 875 Gene3D - 726 875 IPR039261 -
Gso14g1390 875 Pfam Oxidoreductase molybdopterin binding domain 108 287 IPR000572 -
Gso14g1390 875 CDD cyt_b5_reduct_like 624 870 - -
Gso14g1390 875 PRINTS Cytochrome B5 signature 526 536 IPR001199 -
Gso14g1390 875 PRINTS Cytochrome B5 signature 536 550 IPR001199 -
Gso14g1390 875 PRINTS Cytochrome B5 signature 551 558 IPR001199 -
Gso14g1390 875 PRINTS Cytochrome B5 signature 563 575 IPR001199 -
Gso14g1390 875 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 619 731 IPR017927 GO:0016491
Gso14g1390 875 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 501 580 IPR036400 -
Gso14g1390 875 CDD eukary_NR_Moco 59 444 - -
Gso14g1390 875 Pfam Oxidoreductase NAD-binding domain 750 856 IPR001433 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 74 88 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 96 112 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 149 160 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 175 190 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 233 249 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 250 263 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 317 329 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 348 362 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 362 374 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 389 399 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 414 426 IPR008335 GO:0016491
Gso14g1390 875 PRINTS Eukaryotic molybdopterin domain signature 427 440 IPR008335 GO:0016491
Gso14g1390 875 PANTHER NITRATE REDUCTASE 37 875 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 650 661 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 671 678 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 716 730 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 749 768 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 787 798 - -
Gso14g1390 875 PRINTS Cytochrome B5 reductase signature 843 851 - -
Gso14g1390 875 PIRSF Nitr_rd_NADH 10 874 IPR012137 GO:0006809|GO:0042128|GO:0050464
Gso14g1390 875 Gene3D Translation factors 611 725 - -
Gso14g1390 875 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1390 Gso-Chr14 42939207 42944468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1390 607 866 NADPH P450 reductases AT5G17770 40.613 3.08e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1390 K10534 - gmx:100818642 1795.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1390 14 42939207 42944468 Gso13g0587 13 19402352 19407295 GST