Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1389 ATGGCGGCTTCCATTAGCAACCGTCAATACGGCAGCCACATAAACGACGTCGTTGGCAGAAACAAGCCGCCTCCGCCGTTGGATTTCGACACGGACTTCTCTTCCGACGAGGAAAACGACTACGCTTCATACCTCAAAGAGCTGAACCAGCTGATACAAAAAGGGAACGCCGAAATGGAGGACTCCATTCTGGACCCGCGCCATGAGGGCACCGCGGACGAGTGGGTCCCGCGTAATGCCTCCATGGTGCGGCTCACGGGGAAGTACCCCTTCAATGCGGAGGCCCCACTCCCGCGCCTCATGCACCATGGCTTCATCACCCCGGTTCCACTCCACTATGTGCGGAGCCACGGTTCAGTCGTCAAGGGCAAATTTGAAGACTGGACCGTGGAAGTGACCGGGCTGGTAAAAAATCCAACTCGCCTCACACTGGAAACCCTTTTGAAGAGTTTTCCCCAGCGCGAGTTTCCTGCTACACTCGTGTGCGCGGGGAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGAGCAACGGCTTCAACTGGGGCTGCGGCGGCACCTCCACAACTCTCTGGCGCGGCGTCCCCCTCCGCCACGTCCTTCGCCACTGCGGCATCCTCTCGCATTCCAAGGGCGCGCACTACGTGAACTTCGAGGGCGCTGAGGATCTCCCCGGAGGCGGTGGATGCAAGTACGGAACAAGTATCACGAGAGAAGCCGCCATGGACCCCTCCCGTGACATCATCATCGCGTACATGCAAAACGGCGAGCTTCTAGCGCCGGATCACGGGTACCCCGTGCGCATGATTATTCCGGGGTTTATAGGTGGAAGAATGGTGAAGTGGCTCAAACGCATTGTCGTTTCTGAGCATGAGTCGGAGAGTTATTACCATTATAAGGATAACAGAGTGCTTCCTTCGCAAGTTGACTCAGAGCATGCCGATGCAGAAGGTTGGTGGTATAAGCCGGAATATATCATCAACGAGTTGAACATAAACTCAGTGATAACGACGCCGTGTCACCAGGAGATCTTGCCCATCAACTCATGGACTACGCAGAGGCCCTATCTCCTGAGAGGCTACGCATATACCGGTGGTGGAAGAAAACTGACACGTGTGGAAGTAACACTGGACGTTGGAAAAACGTGGCGCTTGTGCAAATTGGACCGTACTGAGAAACCCAACAAATATGGCAAGTATTGGTGTTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGATGGACTTGCTTGGGACCAAGGAGATTGCAGTTCGAGCTTGGGATGAAGGCCTCAACACCCAGCCTGAACACCTCATTTGGAATGTTATGGGTATGATGAACAACTGCTGGTTCAGGGTGAAAACAAATGTAGCCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAACACCCTACCCAACCAGCAAACCAACCAGGTGGTTGGATGGTAAAGGAAAAACATTTGGAGAAATCACTAGAGAAATTACCAAGCCTCAAAAAGAGTGGTTCCACGCCATCCATGAACACGTCCTCAAAAATGTTCACCATCTCTGAAGTCAAAAAGCACTGCATCTCCGACTCTACTTGGATCATCATCCATGGCCACGTCTATGACTGCACCCGATTCCTCAAAGACCACCCCGGTGGTGTTGATAGCATCCTCATAAATGCTGGTACTGACTGCACTGAAGAGTTCGATGCCATCCATTCTGAAAAAGCAAAAAAAATGCTCGAAGATTTTCGAATTGGCGAGCTCATGAGCACAGGTTACACCTCAGACTCATCACCGAACAACTCCGTGCATGGCAATTCTGAATTCACCCACTTGCCCCTTATTAAGGAAATCACCACAACACCACCACCACCACCACGCGACGTGGCTCTTAAAACACGTGAGAAAATCCCATGCAAGCTCGTGTCGAAGACTTCCATTTCCCACGATGTGAGGCTCTTCCGTTTTGCCTTACCCTCAAAAGACCAGCTCCTAGGTTTACCCGTGGGGAAGCATATTTTCCTATGTGCCACCATCAATGAGAAGCTATGCATGCGAGCCTACACTCCAACAAGTAGTGTGGACGAAGTAGGGTTCTTCGATCTTGTCATAAAGGTTTACTTCAAAGGCGTGCACCCCAAGTTCCCAAAGGGAGGACTCATGTCTCAGCATTTGGACTCCCTCTCCATTGGGTCTGTGTTGGACGTGAAAGGCCCATTGGGCCACATAGAGTACACCGGAAGAGGCAACTTCTTGGTTCATGGAAAGCAAAGATTCGCAAAGAGGCTAGCCATGTTGGCTGGTGGAACTGGGATCACACCCATTTACCAAGTGGCACAAGCGATTCTGAAGGACCCAGAGGACCCCACAGAGATGCATGTGGTCTATGCAAACAAAACTGAGGATGATATTTTGTTGAAGGAAGAAATGGATGTGTGGGCGAAGAAACATAGTGACCGATTCAAGGTGTGGTACGTGGTGGAAACTGCTAGGGAAGGATGGGAATACAGTGTTGGGTTCATCACAGAAAGTATCATGAGGGAGCACCTTCCAGAAACGTCAACGGATGCCTTAGCTTTGACATGTGGGCCACCACCTATGATTCAATTTGCAGTGCAGCCTAATTTGGAGAAGATGGGATATGATATCAAGAACGATCTACTTGTGTTTTAG 2661 0.5111 MAASISNRQYGSHINDVVGRNKPPPPLDFDTDFSSDEENDYASYLKELNQLIQKGNAEMEDSILDPRHEGTADEWVPRNASMVRLTGKYPFNAEAPLPRLMHHGFITPVPLHYVRSHGSVVKGKFEDWTVEVTGLVKNPTRLTLETLLKSFPQREFPATLVCAGNRRKEQNMVKQSNGFNWGCGGTSTTLWRGVPLRHVLRHCGILSHSKGAHYVNFEGAEDLPGGGGCKYGTSITREAAMDPSRDIIIAYMQNGELLAPDHGYPVRMIIPGFIGGRMVKWLKRIVVSEHESESYYHYKDNRVLPSQVDSEHADAEGWWYKPEYIINELNINSVITTPCHQEILPINSWTTQRPYLLRGYAYTGGGRKLTRVEVTLDVGKTWRLCKLDRTEKPNKYGKYWCWCFWSLEVEVMDLLGTKEIAVRAWDEGLNTQPEHLIWNVMGMMNNCWFRVKTNVAKPHKGEIGIVFEHPTQPANQPGGWMVKEKHLEKSLEKLPSLKKSGSTPSMNTSSKMFTISEVKKHCISDSTWIIIHGHVYDCTRFLKDHPGGVDSILINAGTDCTEEFDAIHSEKAKKMLEDFRIGELMSTGYTSDSSPNNSVHGNSEFTHLPLIKEITTTPPPPPRDVALKTREKIPCKLVSKTSISHDVRLFRFALPSKDQLLGLPVGKHIFLCATINEKLCMRAYTPTSSVDEVGFFDLVIKVYFKGVHPKFPKGGLMSQHLDSLSIGSVLDVKGPLGHIEYTGRGNFLVHGKQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDPTEMHVVYANKTEDDILLKEEMDVWAKKHSDRFKVWYVVETAREGWEYSVGFITESIMREHLPETSTDALALTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1389 886 PANTHER NITRATE REDUCTASE [NADH] 2 40 886 - -
Gso14g1389 886 Pfam Oxidoreductase FAD-binding domain 635 741 IPR008333 -
Gso14g1389 886 PIRSF Nitr_rd_NADH 5 885 IPR012137 GO:0006809|GO:0042128|GO:0050464
Gso14g1389 886 SMART Cyt_b5_2 513 585 IPR001199 -
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 83 97 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 105 121 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 158 169 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 169 181 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 184 199 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 242 258 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 259 272 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 275 288 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 326 338 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 357 371 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 371 383 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 398 408 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 423 435 IPR008335 GO:0016491
Gso14g1389 886 PRINTS Eukaryotic molybdopterin domain signature 436 449 IPR008335 GO:0016491
Gso14g1389 886 PANTHER NADH-CYTOCHROME B5 REDUCTASE 40 886 IPR001834 GO:0016491
Gso14g1389 886 CDD eukary_NR_Moco 69 453 - -
Gso14g1389 886 Pfam Cytochrome b5-like Heme/Steroid binding domain 515 584 IPR001199 -
Gso14g1389 886 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 541 548 IPR018506 GO:0020037
Gso14g1389 886 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 134 169 IPR022407 GO:0043546
Gso14g1389 886 SUPERFAMILY Riboflavin synthase domain-like 624 742 IPR017938 -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 661 672 - -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 682 689 - -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 727 741 - -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 760 779 - -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 798 809 - -
Gso14g1389 886 PRINTS Cytochrome B5 reductase signature 854 862 - -
Gso14g1389 886 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 66 326 IPR036374 -
Gso14g1389 886 Gene3D - 328 503 - -
Gso14g1389 886 Gene3D - 505 586 IPR036400 -
Gso14g1389 886 PRINTS Cytochrome B5 signature 535 545 IPR001199 -
Gso14g1389 886 PRINTS Cytochrome B5 signature 545 559 IPR001199 -
Gso14g1389 886 PRINTS Cytochrome B5 signature 560 567 IPR001199 -
Gso14g1389 886 PRINTS Cytochrome B5 signature 572 584 IPR001199 -
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 544 554 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 689 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 760 779 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 795 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 798 809 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 830 846 IPR001709 GO:0016491
Gso14g1389 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 854 862 IPR001709 GO:0016491
Gso14g1389 886 Gene3D Translation factors 623 736 - -
Gso14g1389 886 CDD cyt_b5_reduct_like 635 881 - -
Gso14g1389 886 Pfam Mo-co oxidoreductase dimerisation domain 324 454 IPR005066 GO:0016491|GO:0030151
Gso14g1389 886 Gene3D - 737 886 IPR039261 -
Gso14g1389 886 Gene3D - 87 327 IPR036374 -
Gso14g1389 886 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 630 742 IPR017927 GO:0016491
Gso14g1389 886 Pfam Oxidoreductase molybdopterin binding domain 117 296 IPR000572 -
Gso14g1389 886 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 729 880 IPR039261 -
Gso14g1389 886 Pfam Oxidoreductase NAD-binding domain 761 868 IPR001433 GO:0016491
Gso14g1389 886 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 509 590 IPR036400 -
Gso14g1389 886 SUPERFAMILY E set domains 328 455 IPR014756 -
Gso14g1389 886 Coils Coil 34 54 - -
Gso14g1389 886 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 510 585 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1389 Gso-Chr14 42928495 42934566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1389 623 877 NADPH P450 reductases AT5G17770 40.625 2.93e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1389 K10534 - gmx:100818103 1818.51