Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1385 ATGGATGATAACCCTAACCCCTCACTCCCTCGCGTCTCTTCCTCTTCCTCCCAGGAGTTTCTCAAACAAGTCCAAGCTGCCCTCAAGCGCCATGGCCCTCTCGGTGCGACGCAATCCCATAACGTGAGGCCGAAGCGCGCCACGGTGGCTCTGCGAAATGCCGCGAACAAGTTTGAGGAGGAAACGCCGTCAATTTCGGACACCGGCGAAGGCTGTAAAAACGAGTCCTCTTTGCAGGTGGAATCTCTGAGTGTTGGTGCACACAAGAAGGTGCAGTTTTTAACTGAGATCAACAATGCCACTGCACAGCCGCAGGATGAAGCATCGATTGGATTCAATCATCATGTGAAGCACCAAAATACACAGCAGGCAGAATCCGAAACTAGTTTGGTATATGAGGGAGGCAAGAGTTCTCCGCTGCCAAAGAGAACAATAGTTACTCAAGATCATCTGCAGCAATTCAAAAACTTTTTGAGGCAACCAGCTACACAATCTTCCGTAGTGGGATTGCCATGTCCTACAACGACATCAGTCCATTCAACTTCAGCTCCAATGCTGAATTCTATAACTCATTGTTCTAATTCCTGTATAGATAGTGGTTCACATGTGGCTGCAGAACCTTATGGGAACCTGAATGTTAATCCTCATCCTATAACTCAAGGGGATGTTAAATCACCGAATAATTCCCTGAAAGACACCAATAGAATATCAATTGATCAGGTGGCAAGTGCAGTCCAAGATTGTAATTCACTAATTGATGCAGAGTTGACGCTTAAGCAAAGTGACCCATCTAAGGAGCAGCAAGGATGTATGTTAAAGGATACAAGTATTTCAAAATGTACCTCTTGTCGTGATGACATGTTAAGTAAAGGGGAAGTGTCTGCAGCTGTTACCAACATACAGCCTCAGGTTCCTACTTCATCTTCAGAAGTGAAATTGGAGTCTTCTAAGTTGGAAAAGCAAGAGAAAAATACAAGTTCTAAAGCATCATCAGGCCTTCGAAAGAGGGCCTATGACCCTGAATTGTTTTTCAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAGGTGATTTCATCAGACTGTACAATCTATGCACTTAAAAGGATAAAATTAAAGGGTCGTGATTATGCCACTGCATATGGCTTTTGTCAAGAGATCAAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAATAAGGATGGTAGAGTCAAGGATGATGGATATATATACATGGTACTTGAATACGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTGGATGGAAGCAACCAGACCATAGATGAGAACTGGCTTCGGTTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCTTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAACGTGATTCACAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCATTTATGTGCAATGAGAGTGATGCAAGTGGAAACATCATAAAATGTGGTCGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTATCAAATGGTATATGGGAGAACACCATTTGCAGATTACAAGACATTTTGGGCAAAATTCAAAGTTATAACTGATCCAAATCATGAAATTATGTACGCACCAGTTTCAAATCCATGGCTTCTGGATCTTATGAGAAGGTGTCTAGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAGCTGCTACAGCATCCTTTTCTAGTTCCCCCAGTCCCATGTCATTCATCTTTTTACCAAGAACAAACCTTTAAATTGCTGCAACTTATATCTGAAGCTTGCATAAATGACCCAGAATCATCACAGCTCTGTTGTCAGCTCCAACAGGTGCTTGGTAATCCCATCAAGTCAACTAGTATTCATTCATTAAATTCACTAGACCAACAGCATAAATTGCTGTCCCGAATATCAGAACTTTGTATTCTACTACAGGAACGATTGACAAAGACAGATAAACTATAG 2190 0.4192 MDDNPNPSLPRVSSSSSQEFLKQVQAALKRHGPLGATQSHNVRPKRATVALRNAANKFEEETPSISDTGEGCKNESSLQVESLSVGAHKKVQFLTEINNATAQPQDEASIGFNHHVKHQNTQQAESETSLVYEGGKSSPLPKRTIVTQDHLQQFKNFLRQPATQSSVVGLPCPTTTSVHSTSAPMLNSITHCSNSCIDSGSHVAAEPYGNLNVNPHPITQGDVKSPNNSLKDTNRISIDQVASAVQDCNSLIDAELTLKQSDPSKEQQGCMLKDTSISKCTSCRDDMLSKGEVSAAVTNIQPQVPTSSSEVKLESSKLEKQEKNTSSKASSGLRKRAYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKRIKLKGRDYATAYGFCQEIKYLNRLKGKNNIIQLIDYEVTDKALFEGVINGSFSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGSNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDASGNIIKCGRPSDIWSLGCILYQMVYGRTPFADYKTFWAKFKVITDPNHEIMYAPVSNPWLLDLMRRCLAWDRNERWRIPQLLQHPFLVPPVPCHSSFYQEQTFKLLQLISEACINDPESSQLCCQLQQVLGNPIKSTSIHSLNSLDQQHKLLSRISELCILLQERLTKTDKL* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1385 729 Pfam Protein kinase domain 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1385 729 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Gso14g1385 729 MobiDBLite consensus disorder prediction 304 333 - -
Gso14g1385 729 SUPERFAMILY Protein kinase-like (PK-like) 345 652 IPR011009 -
Gso14g1385 729 MobiDBLite consensus disorder prediction 26 45 - -
Gso14g1385 729 Gene3D Phosphorylase Kinase; domain 1 344 428 - -
Gso14g1385 729 MobiDBLite consensus disorder prediction 1 20 - -
Gso14g1385 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Gso14g1385 729 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 11 696 IPR027084 GO:0004712|GO:0007093|GO:0051304
Gso14g1385 729 PANTHER MIXED LINEAGE PROTEIN KINASE 11 696 - -
Gso14g1385 729 ProSiteProfiles Protein kinase domain profile. 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1385 729 SMART serkin_6 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1385 729 Gene3D Transferase(Phosphotransferase) domain 1 465 647 - -
Gso14g1385 729 CDD PKc_Mps1 349 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1385 Gso-Chr14 42692482 42699408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1385 357 645 MAP Kinase Kinase Kinase AT4G08470 29.900 4.43e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Gso14g1385 Pkinase 2.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1385 K08866 - gmx:100816674 1435.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1385 14 42692482 42699408 Gso13g0579 13 19231456 19238101 GST