Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1384 ATGTGTAGCCGCGTAGCCGGCGAATGTGTTCGTCACCTGTGGATCACGGGGGTGGGGCTCTGTGAGAGGCTTCAAACCATTGGAGAAGAACTCTCCATTTATGCAAAAAATTTGGGCATCAACTTGGAGTTCTCGGTGGTGGAGAAGAATTTGGAAAATCTGAAACCAGAGGACATAAAAGTGAGGGAAAAAGAGGTTCTTGTGGTGAATAGCATTCTACAGCTGCATTGCATGGTGAAGGAAAGCGGTGGGGCTTTGAATTTGGTGCTGCAAATGATTCACGGGCTAGGAATTTTGGTTGTTCTTATCCGTAGTTTTCTCTCACAGCCGCAGACAGAGATGGAAGCTGTGTGTGGAAGTTTTTGGGTCACATCCTTTCTTCCACGCTCACCCAAGTCTACTCTCCCTCTATTTCGCTCTACTCATCAACACCTAACAGCATTTCCTTCACAATCCCATCTTTTCTTATATCACCCTCCTCCCTATGCCAATGCTAAAACCCTCCGCGCCAGAACCTCCTTCAAACCCGCCATTTTCCTTCCCCACTTAATTGCTTCTTTGGAACAAGTTGACCAGACTTACATAATGGTCAAGCCCGACGGCGTGCAACGTGGCCTCGTGGGAGAAATTATTTCTAGGTTTGAGAAGAAGGGGTTTAAGTTAACCGGCTTGAAGCTCTTCGAGTGCTCAAAGGAATTAGTTGAGGAGCATTACAAGGATCTAAAACAAAAGTTATTCTTCCCCAAGCTAATTGACTATATTACTTCAGGTCCTGTTATGTGTATGGCTTGGGAGGGTGTTGGGGTAGTCGCATCGGCCCGTAAACTTATAGGTGCTACATATCCTCTTCAAGCTGAACCAGGCACAATAAGAGGAGACCTTGCTGTTCAGACACGAAGGAATGTTGTTCATGGCAGTGACAATCCTGAGAATGGCAAGCATGAAATAGGTAAGGCCTCTTATGCTATCCTGAGAACTTGCCAATGGAACCCCACCTCTTGGGCAGACTATATTGTGAAGAAAGTGACTGTGAATACTTCTCCTGAAGTGGGTGCCGACAATTTATGTGAAGTTTTGATGATTGATGATAAAGACAATAGTTTTTCAACGCCGTCATTCCGGATTAGATATGCAAGGCAGGATGTAATTCTTGCTATCATGATCTCATTTTATGTATCTTATGGCAGATACGAGGGAAAATCTTCTGCTGTTATCTTGAACTTTGAGCTCTTTCACACTCCAACACTTGAAATGCGGTTAGTTAATGATGCTCTTTCTCCTCTTCTGTTCATTAACTGA 1299 0.4442 MCSRVAGECVRHLWITGVGLCERLQTIGEELSIYAKNLGINLEFSVVEKNLENLKPEDIKVREKEVLVVNSILQLHCMVKESGGALNLVLQMIHGLGILVVLIRSFLSQPQTEMEAVCGSFWVTSFLPRSPKSTLPLFRSTHQHLTAFPSQSHLFLYHPPPYANAKTLRARTSFKPAIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFECSKELVEEHYKDLKQKLFFPKLIDYITSGPVMCMAWEGVGVVASARKLIGATYPLQAEPGTIRGDLAVQTRRNVVHGSDNPENGKHEIGKASYAILRTCQWNPTSWADYIVKKVTVNTSPEVGADNLCEVLMIDDKDNSFSTPSFRIRYARQDVILAIMISFYVSYGRYEGKSSAVILNFELFHTPTLEMRLVNDALSPLLFIN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1384 432 Pfam GRAS domain family 11 97 IPR005202 -
Gso14g1384 432 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 139 332 - -
Gso14g1384 432 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC 139 332 - -
Gso14g1384 432 Gene3D - 186 328 IPR036850 -
Gso14g1384 432 SUPERFAMILY Nucleoside diphosphate kinase, NDK 191 317 IPR036850 -
Gso14g1384 432 CDD NDPk_I 192 317 - -
Gso14g1384 432 SMART ndk_5 190 323 IPR034907 -
Gso14g1384 432 Pfam Nucleoside diphosphate kinase 192 317 IPR034907 -
Gso14g1384 432 PRINTS Nucleoside diphosphate kinase signature 193 215 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso14g1384 432 PRINTS Nucleoside diphosphate kinase signature 237 256 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso14g1384 432 PRINTS Nucleoside diphosphate kinase signature 257 274 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso14g1384 432 PRINTS Nucleoside diphosphate kinase signature 278 294 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso14g1384 432 PRINTS Nucleoside diphosphate kinase signature 301 320 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1384 Gso-Chr14 42621285 42625278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1384 15 83 GRAS Transcription Factor Family AT3G03450 36.842 2.40e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso14g1384 NDK 1.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1384 K00940 - gmx:100786376 643.269