Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1358 ATGAGTACTACACCACAAGAGAAGTTTGTTAGGTTTCAGGATTGGAATTCAGAGAAGGGTTCTGAGAGTAATTATCCTGCAATTAAAATAACACACTCGGAGAGATTTAGAACTACATTAAGTTCAGTTTCTGAGAAGTTTCAAAATGGATTGGAATCTGGTTCTGAGAGGATGAAGAGATTTAGAACATCATTCAAATCTTTTCCCTATGGTAGTGTTCTTTCTAGAAGCTTTAGTTCTAGAAAGAAAATCCTTGATCCTCAGGGTCCGTTCCTTCAAAAGTGGAACAAGATTTTTGTATTATTATGTGTCATTGCTGTATCGCTGGATCCTTTGTTCTTTTATGTCCCGGTTATTGAGGATGCGAAGAAATGTCTTTCACTGGACAGCAAGATGGAGATTACAGCAACTGTCTTGAGATCTTTCTCTGATGCTCTTTATATAATCCACATGATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGTGTATTTGGAAGAGGTGTTTTGGTTGAAGATTCTTGGGCAATAGCTAGGCGGTATCTATCATCATATTTCATAATTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTCTAGTTATCATTCCAGAGATGAGTGGTTTTAAATCACTTAATACAAAGAACTTGCTGAAATTTGTTGTTTTCCTCCAATATGTGCCTCGTCTATTGCGAATAATTCCATTATATAATGAAGTTACAAGGACCTCTGGCATTCTCACTGAAACTGCTTGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTTGCAAGTCATGTTGTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACATGTTGGCAAGAAGCCTGTCAACGTAATACTACAGTGTGTAACAAGGCTGATATGTATTGTAATGATTATTTGGGTGGGTTGAGCAAAATTTCAGCATTCCTGAGTACTTCTTGCCCAATACAGAACGAAGATAAAAAGCTCTTTGATTTTGGAATTTTTCTTGATGCCCTTCAATCTGGTGTTGTGGAGTCAAGAGATTTTCCACAAAAATTCTTTTACTGCTTTTGGTGGGGCCTAAAAAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTATGTTTGGGAAATCAGTTTTGCAGTTTTCATTTCTGTATCTGGTTTGGTATTATTTTCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACAACCACTAGATTGGAGGAGATGAGAGTAAAAAGGAGGGATGCAGAACAGTGGATGTCTCATCGATTGCTTCCAGATGGCCTGCGAGAGCGAATCAGACGATATGAACAGTACAGATGGCAAGAAACCAGAGGTGTAGATGAAGACAATTTGATTCGTAATCTTCCCAAGGATTTAAGAAGGGACATAAAGCGTCATCTTTGTTTGGCTTTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGACGAACAACTTCTGGATGCAATGTGCGACCTTCTCAAGCCAGTGCTTTACACAGAAGAAAGCTACATTGTCCGGGAGGGAGATCCGGTTGATGAGATGCTCTTCATAATGCGTGGCAAGCTATTGACCATGACAACTAACGGTGGAAGAACCGGCTTCTTCAACTCTGAGTACCTCAAGGCTGGTGACTTCTGTGGAGAGGAGCTTCTCACGTGGGCTTTGGATCCTCATTCCTCACCCAACCTTCCTACCTCAACCAGGACTGTCCAAACCCTTTCAGAAGTGGAAGCCTTTGCCCTGAAAGCCGATGACTTGAAGTTTGTGGCATCACAGTTTCGGCGCCTTCACAGTAAGCAGCTACGCCACACTTTCAGGTTCTACTCGCAACAGTGGCGCACATGGGCTGCATGTTTCATTCAAGCAGCATGGCGGCGCTATAGTAAAAGGAAGCTTGAAGAGTCCCTCGTCGAAGAGGAGAATAGGCTGCAAGATGCATTGGCTAAAGCAGGTGGTAGCTCACCTAGCCTTGGTGCCACAATATACGCTTCAAGGTTTGCTGCTAATGCACTCAGATTGTTACGTCGCAATGGTACAAAGAAGGGTAGGGTGCCAGAGAGATTACCACCCATGCTGCCTCAGAAGCCTGCAGAACCTGATTTTACTGCTGATGAGGAATAG 2157 0.4219 MSTTPQEKFVRFQDWNSEKGSESNYPAIKITHSERFRTTLSSVSEKFQNGLESGSERMKRFRTSFKSFPYGSVLSRSFSSRKKILDPQGPFLQKWNKIFVLLCVIAVSLDPLFFYVPVIEDAKKCLSLDSKMEITATVLRSFSDALYIIHMIFQFRTGFIAPSSRVFGRGVLVEDSWAIARRYLSSYFIIDILAVLPLPQVVILVIIPEMSGFKSLNTKNLLKFVVFLQYVPRLLRIIPLYNEVTRTSGILTETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWQEACQRNTTVCNKADMYCNDYLGGLSKISAFLSTSCPIQNEDKKLFDFGIFLDALQSGVVESRDFPQKFFYCFWWGLKNLSSLGQNLATSTYVWEISFAVFISVSGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDGLRERIRRYEQYRWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDLLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSPNLPTSTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLVEEENRLQDALAKAGGSSPSLGATIYASRFAANALRLLRRNGTKKGRVPERLPPMLPQKPAEPDFTADEE* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1358 718 SUPERFAMILY cAMP-binding domain-like 418 611 IPR018490 -
Gso14g1358 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 716 - -
Gso14g1358 718 Coils Coil 641 661 - -
Gso14g1358 718 Pfam Cyclic nucleotide-binding domain 509 600 IPR000595 -
Gso14g1358 718 MobiDBLite consensus disorder prediction 689 718 - -
Gso14g1358 718 ProSiteProfiles cAMP/cGMP binding motif profile. 489 572 IPR000595 -
Gso14g1358 718 SUPERFAMILY Voltage-gated potassium channels 86 411 - -
Gso14g1358 718 Gene3D - 95 413 - -
Gso14g1358 718 SMART cnmp_10 489 620 IPR000595 -
Gso14g1358 718 Pfam Ion transport protein 95 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso14g1358 718 Gene3D Helix hairpin bin 415 480 - -
Gso14g1358 718 Gene3D Jelly Rolls 487 607 IPR014710 -
Gso14g1358 718 CDD CAP_ED 489 620 IPR000595 -
Gso14g1358 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1358 Gso-Chr14 40275845 40282428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1358 6 717 Ion Channels AT5G53130 78.182 0.0 1143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1358 K05391 - gmx:100801032 1418.29