Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1357 ATGGTATGCCGCAGTTGTGTAAGGTCTTTGGTTGTTCAAGCTGGAACCTTCGCCAACAGAGTGAGAATCAACGGATTTGGGAGGAGTTTGCAGGCAGTTCAGAGTTTTTCTCATTGGCCAATTCGTGAATACAAGACAACCACAAGGATGATGGTTGATACGGGTTCTATGTCAAGGGCTGGACCCCTTGTTGATACGATGCCAGAGAAAGATGATGATGGTCGGTTTGCCAGTGGAGGGTGGAAAAGTGACGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGGGGAAAGAGAGTGACAATGGAGGATTTTTATGATATTAAGACATTGAAGATTGGTGGCCAATCAATATGCTTATTTGGAATATTTGATGGTCACGGTGGTTCTCGTGCTGCTGAGTATTTAAAGGAGCATCTTTTTGATAATCTCTTGAAGCATCCAAAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTAATTTTCTGGATTCTGAAAAGGACACCTTCAGGGATGATGGATCTACAGCTTCGACAGCAGTTTTGGTTGATAACCATCTTTATGTAGCAAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCAAATGCTCTCTCTGAGGATCATAAACCAAATAGAAGTGATGAGCGGAAGAGAATCGAGAATGCTGGTGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGTAACCGTATGCTGAAGCAGTTTGTAGTAGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACAAATTGAACTGATTATTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGATGATGCTGTTTCTCTTGCCCGCACGGAAGAGGAGCCTGAGGCAGCTGCACGAAAGTTAACAGAAGCAGCATTTTCTCGTGGGAGTGCAGATAACATTACATGCATTGTGGTGCAATTCCACCATGAGAAAGCAGAACTAGCTAATCCTGACAAAGCAGAAGCAGCTAGTGCTCAGCATGAGTAG 1071 0.436 MVCRSCVRSLVVQAGTFANRVRINGFGRSLQAVQSFSHWPIREYKTTTRMMVDTGSMSRAGPLVDTMPEKDDDGRFASGGWKSDDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISETYQQTDANFLDSEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKANALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEQIELIILASDGLWDVVQNDDAVSLARTEEEPEAAARKLTEAAFSRGSADNITCIVVQFHHEKAELANPDKAEAASAQHE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1357 356 PANTHER ALPHABET, ISOFORM E-RELATED 42 349 - -
Gso14g1357 356 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Gso14g1357 356 CDD PP2Cc 89 335 IPR001932 -
Gso14g1357 356 Gene3D - 81 356 IPR036457 -
Gso14g1357 356 SMART PP2C_4 79 333 IPR001932 -
Gso14g1357 356 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 42 349 - -
Gso14g1357 356 SMART PP2C_SIG_2 87 335 IPR001932 -
Gso14g1357 356 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Gso14g1357 356 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Gso14g1357 356 SUPERFAMILY PP2C-like 87 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1357 Gso-Chr14 40192358 40203552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1357 1 341 PP2C-type Phosphatase Gene Family AT5G53140 68.044 2.97e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1357 K17506 - gmx:100813138 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1357 14 40192358 40203552 Gso4g0618 4 5992243 6025504 PCT
Gso14g1357 14 40192358 40203552 Gso6g0618 6 5722419 5741745 PCT
Gso4g0618 4 5992243 6025504 Gso14g1357 14 40192358 40203552 PCT
Gso6g0618 6 5722419 5741745 Gso14g1357 14 40192358 40203552 PCT