Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1355 ATGGAGTGCAACAAAGATGAGGCAGCTAGGGTCAAAGAAATAGCAGAGAGGAAATTTACTGAAAGGGAATATGCTGGTGCAAAAAAGTTTGCTCTCAAGGCTCTAAATTTGTTTCCTGCACTGGAGGGTCTTTCCCAGTTGCTAACAACACTTGATGTTTATATCTGTGCCGAGAATAAAATACATGGAGAAATGGATTGGTATGGTATACTTGGAGTGTATCCATATGCGGATGAAGAGACAGTTAGGAAGCAGTACAGAAAGCTGGCTCTAACTCTTCACCCTGACAAAAACAAGTCTCCAGGTGCAGAAGGTGCATTCAAGCTTGTTTCAGAGGCGTGGAGTTTACTATCAGATAAGGTCAAAAGACTAGCATATAACCAGAACAGGAGATTGGAAGGATTTCAGGATAATGCTCCCAACAAGAATGGTTATATAAAACTTAACAAGAATGCAACTTCAAGCATGAGAACAGGAAATAATGATGCTCGGGCACATCCACATCCGCATACACCCTCCATTCCTCCTCCACATACAAATGCTGGTACCTTTTGGACTATCTGTAATAAGTGCAAGACACATTATGAGTATCTCAGGACATATTTGAATCAAACCCTTTTATGTCCCAATTGTAAACAAGCTTTTGTGGCTATAGAGAAGGGTCCGCCTCCCAATGTTTTCAAGTCATCTAATTGGTCTTCTCGGCAACATCATCAGAAGTCTTCTCGGCAACATTCCAATGTTGGAAGGAATCACCCTGTGAATCCAGGAAGAACTGGTGCTGTTTCTCAAAATTTACAATCCAGCGGTTTTAGTAAACCAAACTTCCAGTGGGGTCCTCACTCGAGAATGGCTGGCTTTGTTAAAAAAGATGGATCATCTTCTGTTTCAGCTGCAAATGTTAAGCAGCAGTCAAGTGAGACAAAAAGAGAATGCGAGGGAGTCCAGTCAATTGCTGCATGGGAGAGGAATCATATGCATAAGAGGTCTGATGTTCCTTTTAGTAATGCCGAAAAACCTATGAAGAAAATGAGGACAGATGATATGTACAATACAAATCATATGACCATGAGAGATGGATCAAGCAGTTTGGGCCATTTTTATGGATCAGGAAAAGCTAATGTGGGAGCAGAAAGGATTCATGTTTTTTCAGGTACTTACAAGCATTACAGCACAAAAGAGTTGTCATTGTTTGAATTACGAAATATGTTGGTTGATAAGGCACAGACTGAAATTCGCGAGAAACTTCTAGAATGGAGATCAATGGCTGAAGCTAGGATTACAAACAAGGACAAAGGAAACAAGAGACAGAAAAGCACATTCAATGACAAAACAACTGGTCCAGAGAAAGATTCCACTATTAATGGTAACAGGCACGTGGACAGTGATTCTATCCCAGTCAAATCTGATGATACTGAAAAGGAGAAGGCAGCCTATGTTACAATCAATGTTCCAGATCCCGATTTTCACAATTTTGACTTGGACAGAACTGAAAATTCTTTTGCGGAGGACCAGGTCTGGGCAGCTTATGATGATGATGATGGAATGCCTCGCTATTATGCTAGAATTCACAAGGTGATTTCCACAAAGCCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTGCTGGTTTTTACAAAACATGTGGGGATTTCAGGACTGGCAGACATGAAATAACTGAATCGTTAAATTCCTTTTCGCACAAGGTAAGGTGGACAAAAGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGGAAGGGGGAGGTCTGGGCTCTCTATAGAAACTGGTCTCCTGATTGGAATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAAGTGGTTGAAGATTTCAATGAAGAGGAAGGTTTATTGGTCACACCACTTGTTAAAGTTGATGGTTTTAGGACAGTGTTTCACAGGCGCAGCCATGATCAGGCAAGAAAGATTCCTAAAGTGGAGATATTTCAATTCTCTCATCAGGTTCCTAATTACTTGCTTACTGGGCAAGAAGCTCATAATGCTCCAAAGGGCTGCCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTTCTTCAGACAACAGCTGAAGAGGCATTGGATAATGTTGGAAAATCAAAGGAAGACACTTACCCCGGGTCACCTGAAAACCATGCTGCTGGTAAGGGGGAGAATGCTTCAAAACCTACTAGAGAAGATATGTTAGACGAGGATGGTAAACAGGATTTGAAGAGGAAATTGGTGCGTTGCTTGAAGGAATGTTTTTGA 2313 0.4163 MECNKDEAARVKEIAERKFTEREYAGAKKFALKALNLFPALEGLSQLLTTLDVYICAENKIHGEMDWYGILGVYPYADEETVRKQYRKLALTLHPDKNKSPGAEGAFKLVSEAWSLLSDKVKRLAYNQNRRLEGFQDNAPNKNGYIKLNKNATSSMRTGNNDARAHPHPHTPSIPPPHTNAGTFWTICNKCKTHYEYLRTYLNQTLLCPNCKQAFVAIEKGPPPNVFKSSNWSSRQHHQKSSRQHSNVGRNHPVNPGRTGAVSQNLQSSGFSKPNFQWGPHSRMAGFVKKDGSSSVSAANVKQQSSETKRECEGVQSIAAWERNHMHKRSDVPFSNAEKPMKKMRTDDMYNTNHMTMRDGSSSLGHFYGSGKANVGAERIHVFSGTYKHYSTKELSLFELRNMLVDKAQTEIREKLLEWRSMAEARITNKDKGNKRQKSTFNDKTTGPEKDSTINGNRHVDSDSIPVKSDDTEKEKAAYVTINVPDPDFHNFDLDRTENSFAEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNSELGPIDWVGAGFYKTCGDFRTGRHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNENTPDEVIHKYDMVEVVEDFNEEEGLLVTPLVKVDGFRTVFHRRSHDQARKIPKVEIFQFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLLQTTAEEALDNVGKSKEDTYPGSPENHAAGKGENASKPTREDMLDEDGKQDLKRKLVRCLKECF* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1355 770 MobiDBLite consensus disorder prediction 446 462 - -
Gso14g1355 770 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gso14g1355 770 MobiDBLite consensus disorder prediction 428 470 - -
Gso14g1355 770 MobiDBLite consensus disorder prediction 428 445 - -
Gso14g1355 770 MobiDBLite consensus disorder prediction 717 754 - -
Gso14g1355 770 MobiDBLite consensus disorder prediction 222 312 - -
Gso14g1355 770 SMART dnaj_3 65 122 IPR001623 -
Gso14g1355 770 MobiDBLite consensus disorder prediction 740 754 - -
Gso14g1355 770 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Gso14g1355 770 MobiDBLite consensus disorder prediction 152 179 - -
Gso14g1355 770 CDD DnaJ 66 119 IPR001623 -
Gso14g1355 770 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gso14g1355 770 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gso14g1355 770 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gso14g1355 770 Gene3D DnaJ domain 63 165 IPR036869 -
Gso14g1355 770 PANTHER BNAC03G44070D PROTEIN 1 724 - -
Gso14g1355 770 MobiDBLite consensus disorder prediction 246 276 - -
Gso14g1355 770 Pfam DnaJ domain 66 127 IPR001623 -
Gso14g1355 770 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gso14g1355 770 PANTHER HEAT SHOCK PROTEIN-LIKE 1 724 - -
Gso14g1355 770 Pfam Domain of unknown function (DUF3444) 481 686 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1355 Gso-Chr14 40117980 40126971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1355 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.895 2.94e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1355 - - gmx:100799958 1582.39