Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1327 ATGTCAAGCAATGCATTAACTCTTTTTATCTTGTTTCTCAACATCTCCTTGATCCCAGCCACCTCTGCTCTGAACCAGGAAGGTCTCTCTCTACTTTCATGGCTCTCAACATTCAATTCCTCAGATTCTGCTACTGCTTTTTCATCATGGGATCCAACCCACCAGAGTCCATGCAGATGGGACTACATAAAGTGTTCCAAAGAAGGGTTTGTCTCAGAGATCATAATAGAATCCATTGATCTTCACACCACCTTCCCTACACAGCTTCTTTCTTTTGGCAACCTTACCACTCTAGTCATCTCAAATGCAAACCTCACTGGTGAGATTCCCGGTTTGGTGGGAAACTTGTCATCATCAGTGGTTACTTTGGACCTCAGCTTCAATGCTTTATCAGGAACCATTCCATCTGAAATAGGGAACTTGTACAAACTCCAGTGGCTGTATTTGAATTCAAATTCCTTGCAAGGTGGAATTCCATCCCAAATTGGAAACTGTTCGAAGCTGAGGCAGCTGGAACTGTTTGATAACCAGCTATCTGGCTTGATTCCTGGGGAAATAGGCCAGTTGAGGGATCTTGAAACCCTTCGGGCTGGAGGGAACCCGGGGATTCATGGTGAAATTCCAATGCAGATATCAAACTGCAAGGCTCTAGTTTATCTAGGCCTTGCAGACACAGGGATATCAGGGGAGATTCCACCAACTATAGGAGAGCTTAAAAGTCTCAAGACACTTCAAATCTACACTGCACACCTCACAGGTAACATCCCACCAGAGATTCAGAACTGCTCAGCCTTGGAGGAATTGTTTCTCTATGAAAACCAGCTTTCTGGAAACATTCCCTCTGAATTGGGTTCCATGAAAAGCCTCAGAAAGGTACTTCTGTGGCAGAATAATTTCACTGGAACAATTCCAGAAAGTTTGGGAAACTGTACAAGCCTGAGAGTCATAGATTTTTCTATGAATTCTTTGGTTGGTGAACTTCCTGTGACTCTCAGTAGTCTAATCTTGTTGGAAGAGTTTCTTTTGTCTAATAACAACATTTCTGGAGGGATACCTTCATATATTGGCAACTTCACCAGTCTGAAGCAACTGGAATTGGATAATAACAGATTCTCTGGGGAGATTCCACCTTTCTTGGGGCAACTGAAGGAACTCACCTTGTTCTATGCCTGGCAGAATCAGCTCCATGGAAGCATACCAACAGAACTCTCCAACTGTGAGAAACTTCAAGCAATTGATCTTTCACATAATTTCCTCATGGGGTCCATTCCAAGTTCACTGTTTCATCTAGAGAATTTAACACAGTTATTGTTGTTATCAAATAGACTTTCAGGTCCAATTCCTCCAGATATTGGCAGTTGCACCAGCTTGGTCAGGCTAAGGTTGGGATCAAACAACTTCACTGGCCAAATTCCACCAGAAATAGGCTTTTTAAGAAGTTTGAGCTTTCTTGAGTTGTCAGATAATTCACTCACTGGAGATATACCCTTTGAGATAGGTAACTGTGCTAAGCTAGAGATGCTTGACTTGCACAGCAATGAGTTGCAAGGAGCAATTCCTTCCTCATTAGAATTCTTAGTTAGTCTTAATGTCTTGGATCTTTCTGCAAACAGAATAACTGGCAGCATTCCTGAAAATTTAGGCAAGCTAGCCTCTCTAAATAAGTTGATACTCAGTGGAAACCAAATCACTGATTTGATCCCTCAGTCACTTGGTTTCTGCAAGGCTTTGCAGTTGCTTGACATAAGCAACAATAAAATCAGTGGTTCCGTTCCTGATGAGATTGGTCACTTGCAAGAACTAGATATCCTCTTGAACTTGAGTTGGAATTCTTTATCAGGCCTCATCCCGGAAACCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCTCACAACAAGCTCTCAGGGAGTCTCAGAATACTGGGTACTCTTGACAATCTATTTTCTCTTAATGTCTCTTACAACAGTTTTTCTGGTTCTCTTCCTGACACAAAATTCTTCAGGGATCTTCCTCCTGCTGCATTTGTTGGCAACCCTGACCTGTGTATTACCAAGTGTCCAGTAAGTGGACATCACCGTGGCATCAAGTCAATAAGAAACATTATCATATACACTTTCCTTGGTGTTATTTTCACTTCAGGATTTGTTACATTTGGAGTAATGTTAGCTCTCAAAATCCAAGGGGGGACTAACTTTGACAGTGAAATGCAATGGGCTTTTACTCCATTTCAAAAACTCAACTTCTCCATCAATGACATTATCCATAAGTTATCAGATTCAAACATTGTGGGAAAGGGTTGCTCGGGAGTTGTTTACCGTGTGGAGACTCCGATGAACCAGGTTGTTGCAGTGAAGAAGCTGTGGCCACCAAAGCATGATGAGACACCAGAGAGAGACCTTTTCGCTGCAGAAGTTCATACCCTTGGATCAATAAGGCATAAAAATATAGTGAGACTTTTAGGGTGCTACAACAATGGAAGAACTAGATTGCTCTTGTTTGATTACATATGCAATGGGAGTTTTTCTGGATTGCTCCATGAAAATAGTTTGTTCTTGGATTGGGATGCAAGATATAAGATCATTCTGGGAGCAGCTCATGGATTAGAATATCTTCATCATGATTGTATCCCTCCAATCATTCATAGAGACATTAAGGCTGGCAACATCTTGGTAGGTCCACAATTTGAAGCTTTTCTTGCTGATTTTGGCCTTGCAAAACTTGTTGGTTCCTCAGATTATTCCGGAGCTTCTGCAATAGTTGCAGGTTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTTCTCATTGAAGTCTTAACGGGGATGGAGCCAATAGATAGCAGGATTCCAGAAGGTTCGCACGTTGTCCCTTGGGTTATCAGGGAAATCAGAGAGAAGAAAACAGAATTTGCATCAATTCTAGACCAGAAACTAACACTGCAGTGTGGAACACAAATCCCTGAGATGCTTCAAGTGCTAGGTGTGGCTCTCCTCTGTGTGAATCCATCCCCAGAAGAAAGACCAACAATGAAAGATGTAACAGCAATGCTCAAGGAGATCAGACATGAAAGCGTGGATTTTGATTTTGAGAAGTCACATCTTCTACATAAAGGTGCTGTCACCAATCCAAAAGCTGCAGTTCAGTGTCCAAGCTTCTCCAGATCTTGTAAACCTCTAACTGAATCACCATCTTCTTCAGTGTCACCACATTAA 3264 0.4185 MSSNALTLFILFLNISLIPATSALNQEGLSLLSWLSTFNSSDSATAFSSWDPTHQSPCRWDYIKCSKEGFVSEIIIESIDLHTTFPTQLLSFGNLTTLVISNANLTGEIPGLVGNLSSSVVTLDLSFNALSGTIPSEIGNLYKLQWLYLNSNSLQGGIPSQIGNCSKLRQLELFDNQLSGLIPGEIGQLRDLETLRAGGNPGIHGEIPMQISNCKALVYLGLADTGISGEIPPTIGELKSLKTLQIYTAHLTGNIPPEIQNCSALEELFLYENQLSGNIPSELGSMKSLRKVLLWQNNFTGTIPESLGNCTSLRVIDFSMNSLVGELPVTLSSLILLEEFLLSNNNISGGIPSYIGNFTSLKQLELDNNRFSGEIPPFLGQLKELTLFYAWQNQLHGSIPTELSNCEKLQAIDLSHNFLMGSIPSSLFHLENLTQLLLLSNRLSGPIPPDIGSCTSLVRLRLGSNNFTGQIPPEIGFLRSLSFLELSDNSLTGDIPFEIGNCAKLEMLDLHSNELQGAIPSSLEFLVSLNVLDLSANRITGSIPENLGKLASLNKLILSGNQITDLIPQSLGFCKALQLLDISNNKISGSVPDEIGHLQELDILLNLSWNSLSGLIPETFSNLSKLSNLDLSHNKLSGSLRILGTLDNLFSLNVSYNSFSGSLPDTKFFRDLPPAAFVGNPDLCITKCPVSGHHRGIKSIRNIIIYTFLGVIFTSGFVTFGVMLALKIQGGTNFDSEMQWAFTPFQKLNFSINDIIHKLSDSNIVGKGCSGVVYRVETPMNQVVAVKKLWPPKHDETPERDLFAAEVHTLGSIRHKNIVRLLGCYNNGRTRLLLFDYICNGSFSGLLHENSLFLDWDARYKIILGAAHGLEYLHHDCIPPIIHRDIKAGNILVGPQFEAFLADFGLAKLVGSSDYSGASAIVAGSYGYIAPEYGYSLRITEKSDVYSFGVVLIEVLTGMEPIDSRIPEGSHVVPWVIREIREKKTEFASILDQKLTLQCGTQIPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHESVDFDFEKSHLLHKGAVTNPKAAVQCPSFSRSCKPLTESPSSSVSPH* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1327 1087 ProSiteProfiles Leucine-rich repeat profile. 625 647 IPR001611 GO:0005515
Gso14g1327 1087 PRINTS Leucine-rich repeat signature 577 590 - -
Gso14g1327 1087 PRINTS Leucine-rich repeat signature 623 636 - -
Gso14g1327 1087 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1055 - -
Gso14g1327 1087 ProSiteProfiles Protein kinase domain profile. 759 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1327 1087 ProSitePatterns Protein kinases ATP-binding region signature. 765 788 IPR017441 GO:0005524
Gso14g1327 1087 Pfam Leucine Rich Repeat 598 623 IPR001611 GO:0005515
Gso14g1327 1087 Pfam Leucine Rich Repeat 408 429 IPR001611 GO:0005515
Gso14g1327 1087 Gene3D Ribonuclease Inhibitor 424 693 IPR032675 -
Gso14g1327 1087 Gene3D Ribonuclease Inhibitor 23 202 IPR032675 -
Gso14g1327 1087 SMART serkin_6 759 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1327 1087 SUPERFAMILY Protein kinase-like (PK-like) 738 1034 IPR011009 -
Gso14g1327 1087 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Gso14g1327 1087 Pfam Leucine rich repeat 504 563 IPR001611 GO:0005515
Gso14g1327 1087 Gene3D Phosphorylase Kinase; domain 1 735 837 - -
Gso14g1327 1087 Gene3D Transferase(Phosphotransferase) domain 1 838 1053 - -
Gso14g1327 1087 Pfam Protein kinase domain 762 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1327 1087 SUPERFAMILY RNI-like 81 417 - -
Gso14g1327 1087 PANTHER LRR RECEPTOR-LIKE KINASE 3 1055 - -
Gso14g1327 1087 SUPERFAMILY RNI-like 351 665 - -
Gso14g1327 1087 Gene3D Ribonuclease Inhibitor 203 331 IPR032675 -
Gso14g1327 1087 Gene3D Ribonuclease Inhibitor 332 423 IPR032675 -
Gso14g1327 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 881 893 IPR008271 GO:0004672|GO:0006468
Gso14g1327 1087 SMART LRR_typ_2 598 622 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 430 454 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 623 645 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 286 310 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 358 382 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 478 502 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 550 573 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 526 549 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 646 679 IPR003591 -
Gso14g1327 1087 SMART LRR_typ_2 141 165 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1327 Gso-Chr14 37078284 37082300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1327 23 1073 Receptor kinase-like Gene Family AT5G56040 47.207 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso14g1327 Pkinase 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1327 - - gmx:100814382 2105.1