Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1323 ATGGCCAAGATGCTGGGCCTCTTGTTCATGATTGGAGCAATGTTGTTTGGTGTTGGAGCTGAACCAGTTGAAGATAAACAAGCATTGCTTGATTTCCTTCAAAGCATTAACCACTCTCATTATCTCAACTGGAATAAGAGCACTTCTGTGTGCAAAAGGTGGATAGGAGTGATCTGCAACAATGACCAATCACAAGTAATAGCTCTTCATTTGACCAGAACTGGATTGAGTGGTCCAATTCCTCCCAACACTCTTAGCCGTCTCTTGGCACTGGAAACTGTGAGTCTTGCATCAAATAGCATAACTGGTTCTTTCCCTACTGGTTTTTCTCAGCTAAAGAATTTGACCTATCTCTATCTCCAATCCAACAATTTTTCTGGTCCATTGCCATCAGACTTTTCAGTTTGGAAGAATCTTAGTATTGCCAATTTATCCAACAATTCTTTCAATGGGAGCATCCCATTCTCACTCTCAAATTTGACTCATCTCACTTCTTTAGTCCTAGTCAACAACTCTCTTTCAGGTGAAGTTCCTGATCTCAATATCCCTACCCTGCAAGAGCTAAATTTAGCCAGCAATAACCTTAGTGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAAGTGGGGCATTTTCTGGTAACAATCTTGTTTCTTCACATGCACTTCCTCCTTCTTTTGCTGTTCAAACCCCAAATCCTCATCCAACAAGGAAAAAATCCAAAGGGCTTAGGGAACCAGCATTGTTGGGAATCATCATTGGTGGTTGTGTGCTGGGAGTTGCAGTGATAGCAACTTTTGCGATTGTGTGCTGCTATGAAAAAGGTGGTGCAGATGGACAACAAGTGAAGTCTCAGAAAATAGAAGTATCTAGGAAAAAAGAAGGTTCCGAAAGCCGAGAGAAGAACAAAATTGTTTTCTTTGAGGGTTGCAATCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCTGAGGTGCTTGGAAAGGGCACGTTTGGGACAGTTTATAAGGCTGCTCTAGAAGATGCAACAACGGTGGCAGTGAAGAGGTTGAAGGATGTCACGGTCGGAAAACGTGAGTTTGAACAGCAGATGGAGATGGTGGGGTGCATTAGGCACGACAATGTGGCTTCACTGAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTCTCTTCAATGTTGCATGGCAAAAGAGGGGGAGGCAGAATTTCATTAGACTGGGACAGCCGTTTGAAAATAACAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGCTCAACATGGAGGGAAACTAGTCCATGGAAACATAAAGGCATCAAACATCTTCCTCAACTCCCAAGGATACGGTTGTCTATCCGACATTGGTCTTGCAACATTGATGAATCCAGCATTGAGGGCAACAGGATACCGTGCACCGGAAGCAACTGACACACGAAAAACATTGCCAGCATCCGATGTCTACAGCTTCGGGGTGCTTCTGCTTGAACTTCTAACAGGGAGGTCTCCCTTACATGCCAAGGGAGGTGATGAAGTTGTCCACTTGGTTAGGTGGGTGAATTCTGTAGTTAGAGAGGAGTGGACTGCAGAGGTGTTTGATGTGGATTTACAAAGGTATCCAAATATTGAGGAGGAAATGGTTGAGATGCTACAAATTGGAATGGCATGTGTTGTGAGAACACCAGATCAGAGGCCAAAAATTGGTGAGGTGGTGAGAATGGTTGAAGAAATTCGTAGACTAATAAACACTGAAAATAGATCATCCACTGAGTCTAGATCAGAAGGTTCCACTCCAATCCCTCATGCAATTGAGACACCTTCTACATCTTTTGCACATTGA 1872 0.4343 MAKMLGLLFMIGAMLFGVGAEPVEDKQALLDFLQSINHSHYLNWNKSTSVCKRWIGVICNNDQSQVIALHLTRTGLSGPIPPNTLSRLLALETVSLASNSITGSFPTGFSQLKNLTYLYLQSNNFSGPLPSDFSVWKNLSIANLSNNSFNGSIPFSLSNLTHLTSLVLVNNSLSGEVPDLNIPTLQELNLASNNLSGVVPKSLERFPSGAFSGNNLVSSHALPPSFAVQTPNPHPTRKKSKGLREPALLGIIIGGCVLGVAVIATFAIVCCYEKGGADGQQVKSQKIEVSRKKEGSESREKNKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKREFEQQMEMVGCIRHDNVASLRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGGGRISLDWDSRLKITIGVARGIAHIHAQHGGKLVHGNIKASNIFLNSQGYGCLSDIGLATLMNPALRATGYRAPEATDTRKTLPASDVYSFGVLLLELLTGRSPLHAKGGDEVVHLVRWVNSVVREEWTAEVFDVDLQRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGEVVRMVEEIRRLINTENRSSTESRSEGSTPIPHAIETPSTSFAH* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1323 623 PANTHER OS05G0588300 PROTEIN 6 616 - -
Gso14g1323 623 Gene3D Transferase(Phosphotransferase) domain 1 396 608 - -
Gso14g1323 623 MobiDBLite consensus disorder prediction 597 623 - -
Gso14g1323 623 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Gso14g1323 623 PANTHER LRR RECEPTOR-LIKE KINASE 6 616 - -
Gso14g1323 623 ProSiteProfiles Protein kinase domain profile. 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1323 623 Pfam Leucine rich repeat 69 125 IPR001611 GO:0005515
Gso14g1323 623 ProSitePatterns Protein kinases ATP-binding region signature. 327 358 IPR017441 GO:0005524
Gso14g1323 623 Gene3D Phosphorylase Kinase; domain 1 285 395 - -
Gso14g1323 623 SUPERFAMILY Protein kinase-like (PK-like) 325 586 IPR011009 -
Gso14g1323 623 SUPERFAMILY L domain-like 27 206 - -
Gso14g1323 623 Pfam Protein kinase domain 324 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1323 623 Gene3D Ribonuclease Inhibitor 23 230 IPR032675 -
Gso14g1323 623 MobiDBLite consensus disorder prediction 593 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1323 Gso-Chr14 36863821 36867997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1323 14 609 Receptor kinase-like Gene Family AT4G23740 54.473 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso14g1323 Pkinase 4.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1323 - - gmx:100810095 1206.82