Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1320 ATGGAACAACAAAACAGCATCCTATGCAAATACACTGAACACCAGACCGTCATGAAAAAACACATGAAATCCAAAGATAACACTTTCTGTTCACCTAAAGTCATCTCCATATCCTTAATCGATCCATACGCCACAGACTCATCCAGCGACGAAGAGAATGTTATGCGCCGGAGGCGCGTGAAGCGCTACGTCAACAGAATCGAACTTCAGCCGGCGTTCAAACCCGTCACTACAAGAAAGAGACACGCCGGAGACGCCGCCACTCTCCGGAAGCCACCGGCGAAGGTGACAAATTCCTGCAGGAAATTCCGCGGCGTGAGGCAGCGGCCGTGGGGTAAATGGGCGGCTGAAATAAGGGATCCCGTGCAGCGAGTGAGAATCTGGCTCGGAACCTTCAAAACCGCCGAGGAGGCCGCCTTGTGCTATGACAATGCGGCGATCACGCTCCGCGGCCCCGACGCGCTAACGAACTTCGGGAGGTCGCGGCCGGAGGAAACGCCGGAAAAAGAAGAGATGGTTGAAAAGGAAGAATTCACATCCGGGAAGCCGGAAATGAAAGTCGTCGTGAAACCAGAGACCCAAGTTTCAGTTTCGGTCTCCGGCTGCTACGACTCGGGCGACGAGTGTTGTCTCAACCTATCGTCGCCCACTTCGGTTCTCCAGTTCAGTGCTGAACCGTATAAACCGGACGAGCCGTTTCCCGGTTCAACCGAAACTCGCACTGTGGTGGAAGAGTGCCATGGCGAGACGGTGTCGTTTAGCGACAGTAGTGAGTGTATTTTAAAAGACATGCCGTGGGATGATGTGTTTAATTTTCCGGTTATGTTTGACGAGCCGCTGTCGCACTTGTTTGATGAAACGACGCCGTTTTCGATTAGTGACGGTTTCGGTGATGAAAAGTTTTTGCCGTCATCAACGTTGTGCCAAGTGGACGATTATTTCCAAGACATCTTGTTAGGGTCAGATCCTCTCGTGGTTCTGTGA 984 0.5213 MEQQNSILCKYTEHQTVMKKHMKSKDNTFCSPKVISISLIDPYATDSSSDEENVMRRRRVKRYVNRIELQPAFKPVTTRKRHAGDAATLRKPPAKVTNSCRKFRGVRQRPWGKWAAEIRDPVQRVRIWLGTFKTAEEAALCYDNAAITLRGPDALTNFGRSRPEETPEKEEMVEKEEFTSGKPEMKVVVKPETQVSVSVSGCYDSGDECCLNLSSPTSVLQFSAEPYKPDEPFPGSTETRTVVEECHGETVSFSDSSECILKDMPWDDVFNFPVMFDEPLSHLFDETTPFSISDGFGDEKFLPSSTLCQVDDYFQDILLGSDPLVVL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1320 327 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 8 322 - -
Gso14g1320 327 SUPERFAMILY DNA-binding domain 102 160 IPR016177 GO:0003677
Gso14g1320 327 Pfam AP2 domain 102 151 IPR001471 GO:0003700|GO:0006355
Gso14g1320 327 Gene3D AP2/ERF domain 101 160 IPR036955 GO:0003700|GO:0006355
Gso14g1320 327 SMART rav1_2 102 165 IPR001471 GO:0003700|GO:0006355
Gso14g1320 327 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Gso14g1320 327 PRINTS Ethylene responsive element binding protein signature 125 141 IPR001471 GO:0003700|GO:0006355
Gso14g1320 327 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 8 322 - -
Gso14g1320 327 CDD AP2 102 158 IPR001471 GO:0003700|GO:0006355
Gso14g1320 327 ProSiteProfiles AP2/ERF domain profile. 102 159 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1320 Gso-Chr14 36601441 36603191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1320 9 233 AP2-EREBP Transcription Factor Family AT4G27950 47.280 1.05e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g1320 AP2 2.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1320 - - gmx:100805277 648.662