Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1304 ATGGACAAAGGGTGGCTTTCAAGTGAGGGTGTTGTGGTAATGGGTAGGTGTTGGTTAGTTGGGGTCATAATTGTGGTGGGGTGTGCTAGTTTTCTGGGCACTGTTGGAGTAGTAGAAGGGTATCCAGCTGAGGATTTGGTGGTGAAATTGCCTGGCCAACCCAAGGTTGGGTTTAAGCAATTTGCTGGATATGTTGATGTAGATGCCAAGCATGGAAGGAGCCTCTTCTACTATTTTGTGGAGGCTGAGCAAGACCCTCACAAGAAGCCCCTCACACTTTGGCTCAATGGAGGTCCTGGATGTTCCTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCCTTTTATCCTAAAGGTGATGGACGTGGTCTCCGAAGAAATTCGATGTCTTGGAATAAAGCATCCAACCTTCTTTTTGTGGAGTCTCCAGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTATAATTCTGGAGATGCCTCCACTGGACACTATATACCTCAATTAACTAATGTTTTATTGGACCATAATGCTCGTTCAACTGGTTCCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTTTGAGACTTGACCGGGATGCACCTGCAATTTATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCCATTATGAATGATTGTGATTTTGATGATTATGTCTATGCAAGTCCTCACAATGTTTCTCAATTGTGCAACAATGCCATATATGAAGCAAATCTCATTGTTGGTGATTATATAAACAACTATGATGTAATTCTAGATGTTTGTTATACATCCATTATGGAACAAGAACTCAGATTGAAAAGGATGGCAACTAAAATAAGTGTTAGTGTAGATGTGTGTATAACTCTAGAAAGACGTTTTTACTTCAATCTCCCTGAGGTCCAAAAGGCTCTTCATGCAAACCGTACAAATCTTCCTTATAGCTGGTCCATGTGTAGTCATGTTCTAAACTACAGAGACACCGATGGTAACATCAACATCCTTCCAATTCTCAAAAGAATAGTCCAAAACCATATCCCAGTATGGGTTTTCAGCGGAGACCAAGATTCTGTTGTGCCACTATTGGGATCTCGAACACTCATTCGTGAACTAGCTCATGAATTGCAATTCAAGATTACAGTCCCATATGGGGCTTGGTTCCACAAAGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACCTTTGCCACTGTAAGAGGAGCTGCTCACATGGTACCTTATGCACAACCTTCAAGAGCACTTCATCTATTCAGTTCTTTTGTGCGTGGCAGGAGGTTGCCCAACACAACACGTCCTTCAATTGATGAATAA 1371 0.4179 MDKGWLSSEGVVVMGRCWLVGVIIVVGCASFLGTVGVVEGYPAEDLVVKLPGQPKVGFKQFAGYVDVDAKHGRSLFYYFVEAEQDPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNSGDASTGHYIPQLTNVLLDHNARSTGSKFNIKGVAIGNPLLRLDRDAPAIYEYFWSHGMISDEIGLAIMNDCDFDDYVYASPHNVSQLCNNAIYEANLIVGDYINNYDVILDVCYTSIMEQELRLKRMATKISVSVDVCITLERRFYFNLPEVQKALHANRTNLPYSWSMCSHVLNYRDTDGNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSIDE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1304 456 Pfam Serine carboxypeptidase 160 443 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 Gene3D alpha/beta hydrolase 163 283 IPR029058 -
Gso14g1304 456 SUPERFAMILY alpha/beta-Hydrolases 43 446 IPR029058 -
Gso14g1304 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 Gene3D - 344 443 - -
Gso14g1304 456 Gene3D - 297 333 - -
Gso14g1304 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 164 450 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 164 IPR001563 GO:0004185|GO:0006508
Gso14g1304 456 PANTHER CARBOXYPEPTIDASE 164 450 - -
Gso14g1304 456 PANTHER CARBOXYPEPTIDASE 18 164 - -
Gso14g1304 456 Gene3D alpha/beta hydrolase 42 162 IPR029058 -
Gso14g1304 456 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1304 Gso-Chr14 35421094 35427210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1304 303 446 Calmodulin-binding Proteins AT2G22960 25.694 1.07e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1304 K16297 - gmx:100801752 923.309