Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1288 ATGGCCAAAAATCGTGAGAACGCAGCTGCAGGAGCGAATCCCATTCATGAAAAGAGGAAATACACCCGTTGGACTGAGGAGGAACACAGGCAGTTTCTTCGCGGGGTCGAAGAATATGGCAAGTCAAACTTGACAGATATTGCCAAGAATGTTGTAGTGACCAAAACTCCAGCCCAAGTTGCTAGTCACGCACAGAAGTATTTCCTCCGCCAAAAGAGTGGGAAGAGGACAAGACCTAGCATACATGACACTGAACCAGTAGTGGCACAGCCACAGAACATACATGACAGGGAACCAGTAGTGGCACAGCCACACAACGCAGAGCTGCCAGAGCATCCAATCCAACAAGGGCTAAACCCACCAAACAATATAATAACCAATGATTTTCTAGCAAATTTTAAATGA 405 0.4642 MAKNRENAAAGANPIHEKRKYTRWTEEEHRQFLRGVEEYGKSNLTDIAKNVVVTKTPAQVASHAQKYFLRQKSGKRTRPSIHDTEPVVAQPQNIHDREPVVAQPHNAELPEHPIQQGLNPPNNIITNDFLANFK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1288 134 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 15 98 - -
Gso14g1288 134 SMART sant 20 70 IPR001005 -
Gso14g1288 134 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Gso14g1288 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Gso14g1288 134 SUPERFAMILY Homeodomain-like 18 73 IPR009057 -
Gso14g1288 134 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Gso14g1288 134 Gene3D - 21 73 - -
Gso14g1288 134 Pfam Myb-like DNA-binding domain 23 68 IPR001005 -
Gso14g1288 134 MobiDBLite consensus disorder prediction 1 22 - -
Gso14g1288 134 ProSiteProfiles SANT domain profile. 22 72 IPR017884 -
Gso14g1288 134 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 15 98 - -
Gso14g1288 134 CDD SANT 23 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1288 Gso-Chr14 34746532 34747709 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso14g1288 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1288 - - gmx:102662458 278.485