Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1284 ATGAAACCAAACAAAATGGAAGAAGAAAGAGACTGGCCAACAAGGAAAAGAATAGCTTTAGGAGTTGGAAGAGGCTTGCTATATTTGCACAAACAGTGTGATCCAAAGATTATTCATAGGGATGTGACGGCAGAAAATATCTTGCTTGATGATTATTGTGAGGCCGTGGTAGGAGATTTTGGGTTGGCAAAGCTATTAGACCACAGGGATTCACATGTGACAACAGCAGTGAGAGGCACTGTGGGGCACATAGCCCTTGAGTATCTCTTTACGGGCCACTCTTCTGAGAAAATAGATGTGTTTGGGTTTGGAATTTTTCTTCTTGAACTGATATCTAGCCTAAGAGCTCTTGACTTTGGGAAAGCAGCAAGTGAAGAGATTCAGGTTCTCCAAGAGCAAATGAAAGAAGCACATGCTTCTGAGATAGATTCAGTGAGACGACTTTCATTTGAGACAGAAACCGCAAGAAGGGAAGAGGAAGAAATGAGATCCAAAACACAAGAGCTGAAGCAAGAAGCTGAAAAATGCAAAGCAGTGGCAGAAGAACTAGAGAAGAAACTAGAGCTTTACCTAAAGCAAGATGATGGTGCAAAAGCATCATAA 603 0.4163 MKPNKMEEERDWPTRKRIALGVGRGLLYLHKQCDPKIIHRDVTAENILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIALEYLFTGHSSEKIDVFGFGIFLLELISSLRALDFGKAASEEIQVLQEQMKEAHASEIDSVRRLSFETETARREEEEMRSKTQELKQEAEKCKAVAEELEKKLELYLKQDDGAKAS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1284 200 Gene3D Transferase(Phosphotransferase) domain 1 2 195 - -
Gso14g1284 200 SUPERFAMILY Protein kinase-like (PK-like) 10 120 IPR011009 -
Gso14g1284 200 ProSitePatterns Tyrosine protein kinases specific active-site signature. 37 49 IPR008266 GO:0004672|GO:0006468
Gso14g1284 200 PANTHER OS01G0253100 PROTEIN 10 162 IPR045271 GO:0004714|GO:0006468
Gso14g1284 200 PANTHER NSP-INTERACTING KINASE-LIKE PROTEIN 10 162 - -
Gso14g1284 200 Pfam Protein kinase domain 14 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1284 200 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1284 200 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1284 200 Coils Coil 152 193 - -
Gso14g1284 200 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1284 Gso-Chr14 34618760 34623378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1284 11 138 Receptor kinase-like Gene Family AT5G16000 74.219 1.18e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso14g1284 Pkinase 7.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1284 - - gmx:102668224 355.525