Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1280 ATGGGTTCCTTGGAAGCCGAAAATAAAACTCTCCGTGGCGCCGAAGAAGAAGAGGATTCTACTTCTACCAAGAAACGCGGCAAGTTCTACGACATTTATGGACCCGAAGGCAAGGCGGATGTTGTTTTCAACTCACCAGAAGATAATTCAACTCTCAATCTTAGTGATGTTCAAGGACTTGTAACTTGGGTGCTCGGTGAAGGATTTATGCCGTCATGGGTTTTTATTAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATGTGCCAGGCCTGGACGCAGCTTTGTTCTTGTCGCAGTCTAAAATGCTTCCCAGATTAAAAATTTTCTGTGGCAAACCAAGGGCAGTCCTAGCTCTTAGCTGTGTATCAGATGGTATGCAGACGATAGATGCACTCCTAACATGCAAGATGAAAAGGAAAAGGGACGAGAATAGTTCAATTATGAGGAAATCTGCTCTGACATCTCAACAAGACAGTCTATCGTTTAAGGAGCTTACAAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAAAGAGTTGGAAGAGAATGGATATTCTGTTAATAAGCCAGGTTTTCTTTCTACTTTGCCCGCACCTTCGGGATCTCCTTTTTATGATATGTTGGCACTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAGCTGTCAAGAATTACTTTAGTGGATGTCAAAGGACAGGTTTTGATAGATAAGTTGGTTAAACCATCAAATGCCATCACTGATTACAACACAAGATATAGTGGAATAACGTCAGAGATGTTAGATGGCGTGACGACAAGTCTGAGAGACATTCAGGAAGAGTTCCTAAAGTTGGTTCACAAGGAGACTATCCTTGTTGGGCATTCTCTGGAAAACGATTTGTTAGCATTGAAGATATCTCATGACTTGGTCATTGACACAGCAGTGTTATACAAACACCCCCGAGGATCAACTCATAAAAATGCTCTACGGTTTCTTACTAAGAGATTTCTTTCAAGGGAGATACAACAGTCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTGAAGATCAGAAATGGGCCTAATTTTGGTTCCCCTCCATCCTTTACCCGGAAAAAGCTCCTTTCTATTCTGAGTGAGTCTGGCAAAACCTCCTCACTGATTGATGATATATCTGTAGTAAAACGGTATGCCTCAGAGTCCTCTCATGCAATTCCAGTGACCTCTGATGATGTAGCACTTGCAAAGGCCAACAAGGAGGTGAAGAATGGAAAGGTACATTTTATCTGGACTCAGTTTTCGGAGCTACACTCATACTTGAAGAAACAAGCTGAAGATTCTGAGAGGTTGAATAGAAGACTTGCAGAGATGTTGGCATTACAAACATGTCAGAATAATTTTACAAAAGGGAAAGACTTCAAGTTGAAAGCATCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCATAATCTGTATTTGTCATTACCCACAAATGCCATGATGATAATTTGCACTGGTCACGGAGACACTGCTATTGTCCGCAGGCTGAGAAAAATGCTTGCGGAGCAGAATGAAAGTAATATATGTCGTGAAAAGATTGTGGAAATATTGGAAGAGGTTCAGGCCCGAGCTGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACATTGA 1704 0.4126 MGSLEAENKTLRGAEEEEDSTSTKKRGKFYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTCKMKRKRDENSSIMRKSALTSQQDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPAPSGSPFYDMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVKPSNAITDYNTRYSGITSEMLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPSFTRKKLLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWTQFSELHSYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVALCFVGVKH* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1280 567 Pfam Exonuclease 214 360 IPR013520 -
Gso14g1280 567 PANTHER LD29573P 15 552 - -
Gso14g1280 567 MobiDBLite consensus disorder prediction 9 28 - -
Gso14g1280 567 CDD REX1_like 213 362 IPR034922 -
Gso14g1280 567 Gene3D - 210 370 IPR036397 GO:0003676
Gso14g1280 567 Coils Coil 448 468 - -
Gso14g1280 567 SMART exoiiiendus 211 370 IPR013520 -
Gso14g1280 567 MobiDBLite consensus disorder prediction 1 28 - -
Gso14g1280 567 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 15 552 - -
Gso14g1280 567 SUPERFAMILY Ribonuclease H-like 212 365 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1280 Gso-Chr14 34223653 34253106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1280 212 360 C2H2 Transcription Factor Family AT3G27970 31.176 1.12e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1280 K14570 - gmx:100796963 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1280 14 34223653 34253106 Gso13g0211 13 11606422 11617546 GST