Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1273 ATGGTTATCTTATCTTCCTTCTTCCGCTGTGCACAATCAGTGATTGCCTTTGTGGCTTTCATAATTATTGTGCTATTCCAACAAACTTGCTTTGCCAAGCATCACCCATCCTGTCCTCTTTCTTCATGCGGCAAAGTTCAGAACATAACATATCCATTTCGACTGAAAGGTCACCCAGATGGTTGTGGCCTCTCAAGGTACGAATTAGATTGTGTGAACAACGCGACAGTGCTAACTCTGTTTTCGGGGAAATACCATGTGCAGGATATCGATTACAAGAGGTATCAGATCCGATTGACAGATGCGGGTATCGCGGAGGATACTGCTTGCTCCATTCCTCGCTATGTTTTACAGAGATTTAATTTCAGTGATGATGATCCGCTATTTTTTACGGATGTGAAGGAGTATCAGGATGAGGATTACTATCCTCGAAATGTAGTGTTTCTGAACTGTACTAAGAAAGTGAATGATGATCCTCGATATGTTGAAGTGAATGCCGTTCGTCGTTGTGATTCCGGAGGAGGAGGCCATATCTATGCCCTTCTGAATGGCTTTGGCGAACTTAGTATGATGGACATCAAGGTTGGGTGCCGTTTAACGGCTACTACCTTTGCAAGCTGGAAACGTTACAGGAACGTTTCCTATGCTGATATCCGCAAGTGGCTGCACCAAGGATTTCGGTTATCTTGGTTCTCAACAGTTATTTGTAGAGATCAATGCGGAAAGGGTTACAGAGGTTGCAACATCAATCAAACCACGGGAGAAATTGGATGTGAAGAAAAGAGATACTGCTATATGTTGGGCTACAAATATTACAAAACGACCAAGTATTGCGGTATTCTGGGAATTACATATCTGATTCTGGGATATATACGGTACTATTCTCCTTCTCCCCATATAGTTGGATTTGTCCTTGATATAAGATATCTGCAACTAAAGAACTGGTATGATGGAGTATCCATTGCAAGGAATCTTCTACTGATATTCATGATAGCCAGAATTCTATTTGGAATCACCATTTTGCTTATGGTGTTTATCTACATGTGGAGACGTAGACGTTACTCAATGTATGAAAACATTGAAATGTTTTTGTTAGACAACAATCTAAACCCTATTCGGTACGAATACAAAGAAATCAAGAAAATGACCAAAAATTTCAAACAAAAATTGGGTCAAGGAGGTTTCGGCTCGGTATACAAAGGCAAACTTCGAAGTGGGCCAGATGTGGCAATTAAGATGTTGAGCAAATCTAAAGCTAATGGTGAAGAGTTTATTAGTGAAGTGGCTACAATTGGAAGAATACATCACGTGAATGTGGTACGTCTTGTTGGATATTGTGTTGAAGGAGAAAAACATGGTTTAATTTATGAATACATGCCTAACGGTTCATTGGAAAAATATATTTTCCCTAAAGAAGGAAGAGTCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATTGCTCGGGGTATTGCATATTTGCATGAAGGTTGTGATGTGCAAATTCTACATTTTGATATCAAGCCACACAATATTCTTCTAGATGAGAGCTTCATCCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTACATCCTGTGAAAGATAGGTCTCTTGTTTTACCTGAAGCAATTGGAACTTTGGGCTACATAGCTCCAGAATTATACTACAAAAATATTGGTGGAGTATCATATAAGGCCGACGTTTATAGTTTTGGAAAGCTTTTGATGGAAATGGCAAGTAGAAGGAGGAACTCAGATCCTCTTCCAGATCAACTTTCAAGCAATGATTACTTTCCGTTTTGGATATATGATGAACTCAAGGAAGAAAAAGATATTGACTTGGAAGATGCCTCAGACAAGGATAAGCTTTTAGTGAAAAAAATGTTCATGGTTGCACTTTGGTGTATACAATTTAAACCAAATGATCGTCCTTCAATGAAGAAAATTGTAGAAATGCTTGAAGGAAATGTTGAAAGTCTTGAAATGCCTCCAAAGCCTATTATATACCCACATGATGGTGAAATCAACTCTAACCAAACATCATGGAGTGATTCAACTTGTTCTAGTAAGAATCTTTGCAGAAACAAATCCAATCATTGA 2106 0.3865 MVILSSFFRCAQSVIAFVAFIIIVLFQQTCFAKHHPSCPLSSCGKVQNITYPFRLKGHPDGCGLSRYELDCVNNATVLTLFSGKYHVQDIDYKRYQIRLTDAGIAEDTACSIPRYVLQRFNFSDDDPLFFTDVKEYQDEDYYPRNVVFLNCTKKVNDDPRYVEVNAVRRCDSGGGGHIYALLNGFGELSMMDIKVGCRLTATTFASWKRYRNVSYADIRKWLHQGFRLSWFSTVICRDQCGKGYRGCNINQTTGEIGCEEKRYCYMLGYKYYKTTKYCGILGITYLILGYIRYYSPSPHIVGFVLDIRYLQLKNWYDGVSIARNLLLIFMIARILFGITILLMVFIYMWRRRRYSMYENIEMFLLDNNLNPIRYEYKEIKKMTKNFKQKLGQGGFGSVYKGKLRSGPDVAIKMLSKSKANGEEFISEVATIGRIHHVNVVRLVGYCVEGEKHGLIYEYMPNGSLEKYIFPKEGRVPLSYEKTYEISLGIARGIAYLHEGCDVQILHFDIKPHNILLDESFIPKVSDFGLAKLHPVKDRSLVLPEAIGTLGYIAPELYYKNIGGVSYKADVYSFGKLLMEMASRRRNSDPLPDQLSSNDYFPFWIYDELKEEKDIDLEDASDKDKLLVKKMFMVALWCIQFKPNDRPSMKKIVEMLEGNVESLEMPPKPIIYPHDGEINSNQTSWSDSTCSSKNLCRNKSNH* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1273 701 SMART serkin_6 384 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1273 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Gso14g1273 701 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 683 - -
Gso14g1273 701 Gene3D Phosphorylase Kinase; domain 1 348 458 - -
Gso14g1273 701 CDD STKc_IRAK 390 657 - -
Gso14g1273 701 ProSiteProfiles Protein kinase domain profile. 384 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1273 701 Pfam Wall-associated receptor kinase galacturonan-binding 38 101 IPR025287 GO:0030247
Gso14g1273 701 Gene3D Transferase(Phosphotransferase) domain 1 459 665 - -
Gso14g1273 701 SUPERFAMILY Protein kinase-like (PK-like) 369 656 IPR011009 -
Gso14g1273 701 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Gso14g1273 701 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 683 IPR045874 GO:0004672
Gso14g1273 701 Pfam Protein tyrosine and serine/threonine kinase 386 655 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1273 Gso-Chr14 33826842 33836062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1273 39 671 Receptor kinase-like Gene Family AT5G38260 33.588 2.59e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso14g1273 PK_Tyr_Ser-Thr 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1273 - - gmx:100817208 1405.58