Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1272 ATGAATTTTGGGGCCTGCTTGCAACAGACAATGCTCAATTTTCAGAAATTGTCTCTTCTAATTCTATTGACTTTGGTGTTTCAGCCTGTGAATGTGATAGGCAAGAACCACTACTGCATGCAGAAATGTGGTCGCGTTCATATTCAATTTCCATTTTATCTCAGAAACAGCAATAAGTTCAATCACACCACAGACTATCCCACTGGGTTCGGTCTGTTATGCACTGAAAAAGATGATACTTTGCTGGAGCTACCTTCTGTTCCAATAAAATTGTTTGTCAGAAACATTGATTACAAATCTCAGCAAATTGAAATCTACGACCCTCAAAATTGCCTTCCAAGTCAGCTCTTGAAACTCGGCAATGCATCCATTTCTCCTTTCCAATTTTCGAAGCCAAAAGGTTTTTATGATTACGAGAAAGATTTATACGATTCCAGGACTAACGTTTCCTTCTTCCGTTGTGATTCAAGGTCACTGTGCCCTATTTTTCTACTTGACCCATCGGACGACGTTAATCTATTTATCCCCGATATACTATACTGCACTAAGCTGAAAGATATTTTGTCCGTGAAGTGGTACTTCAATATGGAAGATTGGGATTCAGCAGTGCTTATGGAATGGTCAAAACCTAACTGTAGTTACTGTGAAGCACAAGGCCAGAAATGTAGATGGAAGAATGGTACCAACGGTGAAACTGAATGTTTCGTTTGCCCAACAAACAAGATTCCGACACGGACTGTTCTAATCATTGCTGCAGGAGGAATAGTTGGTTTGATGCTTTTGCTGCTATTGGCCAAGGCATTGTTTCATGTGTATTGCTATCATAAGATGAAAGGAGAAGACCAGGCTCGGATAGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACTCGATTCACTTATGCTGACATTAAGAGAATGACAAATGGGCTTAGTGAGAGTTTAGGGGAAGGGGCTCATGGAGCAGTGTTCAAAGGAATGCTCTCCCGAGAAATTCTTGTTGCTGTGAAGATACTCAACAACGCAGTGGGTGACGGAAAGGATTTCATGAATGAAGTGGGGACTATTGGGAAAATTCATCATGTTAACGTTGTTCGTTTGCTCGGATTCTGCGCAGAAGGGTTCCACCATGCTCTTGTTTATGATTTCTTCCCAAATGGATCGCTGCAGAGATTCTTGGCTCCGCCTGACAACAAGGATGTTTTCCTTGGTTGGGACAAGTTGCAAAGAATTGCTATGGGTGTTGCCAGAGGGATTGAGTATCTCCACCTTGGCTGTGACCAAAGAATACTTCACTTTGATATCAATCCTCACAATGTTTTGCTAGATGAGGACCTCATTCCAAAAATCACTGATTTTGGACTTGCTAAGTTGTGTCCCAAAAATCAAAACACGGTGTCCATGAGTGCAGCCAAGGGAACCTTGGGCTACATTGCCCCTGAAGTTTTCTCAAGAAGCTACGGTAATGTGTCATATAAGTCTGACATTTACAGCTATGGGATGTTGCTGCTGGAGATGGTTGGAGGAAGAAAGAATACAAATGTGTCATTAGAGGAAAGTTTCCAAGTTCTATACCCTGAATGGATCTATAACTTGCTAGAAGGCAGAGACACACATGTTACCATTGAGAATGAGGGAGATGTGAAAACTGCAAAGAAACTTGCCATTATAGGACTTTGGTGCATTCAGTGGAATCCAGTGGACCGTCCATCCATAAAAACGGTTGTGCAAATGCTTGAAGAGGATGGAGACAAATTAATTGCACCCCCCAATCCTTTTGGCACCACCAATTCTTCTGGAACAAATGTCGTTGTTCCAACAAGGCGTCAGAATTTCGAGTTGGAAATTATTCATGAAACAAATGAGTAA 1872 0.4161 MNFGACLQQTMLNFQKLSLLILLTLVFQPVNVIGKNHYCMQKCGRVHIQFPFYLRNSNKFNHTTDYPTGFGLLCTEKDDTLLELPSVPIKLFVRNIDYKSQQIEIYDPQNCLPSQLLKLGNASISPFQFSKPKGFYDYEKDLYDSRTNVSFFRCDSRSLCPIFLLDPSDDVNLFIPDILYCTKLKDILSVKWYFNMEDWDSAVLMEWSKPNCSYCEAQGQKCRWKNGTNGETECFVCPTNKIPTRTVLIIAAGGIVGLMLLLLLAKALFHVYCYHKMKGEDQARIEKFLEDYRAMKPTRFTYADIKRMTNGLSESLGEGAHGAVFKGMLSREILVAVKILNNAVGDGKDFMNEVGTIGKIHHVNVVRLLGFCAEGFHHALVYDFFPNGSLQRFLAPPDNKDVFLGWDKLQRIAMGVARGIEYLHLGCDQRILHFDINPHNVLLDEDLIPKITDFGLAKLCPKNQNTVSMSAAKGTLGYIAPEVFSRSYGNVSYKSDIYSYGMLLLEMVGGRKNTNVSLEESFQVLYPEWIYNLLEGRDTHVTIENEGDVKTAKKLAIIGLWCIQWNPVDRPSIKTVVQMLEEDGDKLIAPPNPFGTTNSSGTNVVVPTRRQNFELEIIHETNE* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1272 623 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 52 621 - -
Gso14g1272 623 Gene3D Phosphorylase Kinase; domain 1 284 384 - -
Gso14g1272 623 ProSiteProfiles Protein kinase domain profile. 310 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1272 623 SUPERFAMILY Protein kinase-like (PK-like) 292 581 IPR011009 -
Gso14g1272 623 Gene3D Transferase(Phosphotransferase) domain 1 385 588 - -
Gso14g1272 623 Pfam Wall-associated receptor kinase galacturonan-binding 39 107 IPR025287 GO:0030247
Gso14g1272 623 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Gso14g1272 623 PANTHER RUST RESISTANCE KINASE LR10-RELATED 52 621 IPR045874 GO:0004672
Gso14g1272 623 Pfam Protein kinase domain 314 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1272 Gso-Chr14 33824249 33826582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1272 276 593 Receptor kinase-like Gene Family AT1G66910 45.846 6.59e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso14g1272 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1272 - - gmx:100816669 1259.2