Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1264 ATGGGTCGTTTAGCAGAGTCGAAGTTGGTGCAAGAGTTGGTTCTGTATGCAGCAAGCGCAGCACTGAGCTGCTTGGTCTTGTTCGTGGGCCTCCGACAGCTCGACCCGAATCGCGAGGCTTCGAAAAAGGCCTTTCAGCACAAAAAAGAGATTGCCAAGCGCCTCGGTCGTCCTCTAGTTCAGACAAACCCTTATGAGGATGTCATAGCATGCGATGTTATCAATCCTGACAACATTGATGTGGAGTTTAACTCTATTGGGGGACTGGAAACTATTAAGCTAGCTCTGTTTGAGCTTGTTATTCTGCCTTTAAAAAGACCTGACTTGTTTTCTCATGGTAAGCTTCTTGGGCCACAAAAGGGTGTCCTCTTGTATGGACCACCTGGCACAGGGAAGACCATGCTTGCCAAAGCTATTGCTAAGGAGTCTGGAGCAGTTTTCATTAATGTCAGGATATCAAACCTGATGAGCAAGTGGTTTGGAGATGCCCAGAAACTCGTGACTGCCATATTTAGCCTAGCTCATAAGCTCCAGCCTGCCATCATATTCATTGATGAAGTTGACAGCTTTTTGGGTCAGCGTCGTACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCTTTATGGGATGGCTTTACTACTGATCAGAATGCTCAAGTTATGGTCCTTGCTGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGACGTCTTCCTCAAGCATTTGAAATTGGTATTCCAGACCAAAGAGAGAGGGCTGACATATTGAAGGTTATCTTGAAGGGTGAGAGGGTTGAAGAAAACATTGACTTTGACCATATAGCTTACTTATGTGAAGGTTACACTGGTTCGGATCTATTTGACCTCTGCAAGAAAGCTGCCTATTTTCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTCTGCTCCCAGACCATTGTCCCAGTTAGACTTGGAGAAGGTCCTTGCCACTTCCCGGAAGACTACCGTTGCTGCATTTGAATACAATGGATTGAGTGCAGATGCTCTAAGATGGTCAGGGCAGGGGGAACAAGATGATTATCAGGTTCAAGCTGCAATAAATGAACTCAAGTTTGTGGTTTCTCACATGATTAACCGCCAGCCAGATGCCAAAGATCTTTAA 1173 0.4476 MGRLAESKLVQELVLYAASAALSCLVLFVGLRQLDPNREASKKAFQHKKEIAKRLGRPLVQTNPYEDVIACDVINPDNIDVEFNSIGGLETIKLALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAIFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERADILKVILKGERVEENIDFDHIAYLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGRSFSAPRPLSQLDLEKVLATSRKTTVAAFEYNGLSADALRWSGQGEQDDYQVQAAINELKFVVSHMINRQPDAKDL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1264 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 312 IPR027417 -
Gso14g1264 390 CDD AAA 116 251 - -
Gso14g1264 390 Gene3D - 80 338 IPR027417 -
Gso14g1264 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 5 378 - -
Gso14g1264 390 Gene3D - 253 333 - -
Gso14g1264 390 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Gso14g1264 390 Pfam AAA+ lid domain 274 310 IPR041569 -
Gso14g1264 390 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 5 378 - -
Gso14g1264 390 SMART AAA_5 118 254 IPR003593 -
Gso14g1264 390 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Gso14g1264 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1264 Gso-Chr14 33092450 33105801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1264 81 333 Calmodulin-binding Proteins AT3G56690 33.846 5.13e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1264 K22530 - gmx:100791694 766.918