Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1255 ATGGGGAAGAAAGGAGGCAGCTGGTTCTCATCTGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGATTCGCCCCAGCCTGAGAAGAAGAAGGACAACACACAGAAATTACAGCATGAAGTGGCAGAGGTGGTGTCCTTTGAGCATTTTCCTGCAGAGAGTTCTCCAGATAATGTGAGCAATGCAGAGATGAGTACGACATCAACGCCAGTGACCAACGAAGATAGAAGCCATGCGATTGCCGTTGCAGCAGCAACTGCCGCAGCTGCAGAAGCTGCTGTGGTGGCTGCTCAAGCAGCTGCAAGAGTTGTAAGATTGGCAGGAAGTTACGGGCGGCAGTCCAAGGAAGAAAGAGCAGCAACACTCATTCAATCATACTATAGAGGCTACCTGGCTCGACGTGCACTACGAGCATTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGCGGAAGCAAGCGCAGATGACGATGCGGTGCATGCAAGCACTGGTGAGGGTGCAGGCACGAGTACGGGCTCGCCGATTCCAATTGAGTCACGCGGATCAGGAAAGAGAGAAGAAAGAAGAGCCCAAGCCCATACCCGTGCCCGTGCCCATGAGCCCCCTGAGAAGAATAGACGACATTAATGACTGGGACAATAGGCGTCAAAGTAGCTACAAAATTAAGGAAAACGATTTGCGGAAACATGAAGCTGTAATGAAGAGAGAGAGAGCTCTTGCATACGCTTTCAACTATCAACAGCAACAACAAAAGCAATTTTTGCAGCCAGACTGGAATGGTAATGATGATGTAGGAACAAACTATGAGCATGAAAAAGCCCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCCCAACCATACAATGTCAGGAACATGGGGCCACATGAGACCTCTTACATGACTCTTGCTTCTACAACATCAACTACCACTGATAACATGTCTGAGAAGACCGTAGAAATGGACATGGTTGCAACTCCAGGCCCAACCAACACTAGAAATGTCAGTCCCATGAACCAAGACTTTGTTGATTTAAGCCCAGTTTCTAATAGGCACCGTCACATACCTCCCAGCCCAAATAGACCTAGCTATATGACCCCAACTCAGTCTGCAAAGGCCAAGGTTCGAGCCCAAGGCCCATCCAAGCCTCGAGTTTCAGTTGGGCAGTGGAACTTCTCAACAAAGGGAGGTTCGACTGGTGACTCATCTAGCTCGGGAGGACGAATTGTCGCTTACCAATTTCCAAGGAGCCCAGGCCCAAAAATTAATGGCATTCGGTCACAGTCTAAAAGGATTGTGGGTAGCAGTCCAGATTACACTGAAGATTGGACCCTTCCACTCGGAGCCCATGGCTGGGCATAA 1377 0.4909 MGKKGGSWFSSVKKVFKSSSKDSPQPEKKKDNTQKLQHEVAEVVSFEHFPAESSPDNVSNAEMSTTSTPVTNEDRSHAIAVAAATAAAAEAAVVAAQAAARVVRLAGSYGRQSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLSHADQEREKKEEPKPIPVPVPMSPLRRIDDINDWDNRRQSSYKIKENDLRKHEAVMKRERALAYAFNYQQQQQKQFLQPDWNGNDDVGTNYEHEKAQWGWNWLERWMSSQPYNVRNMGPHETSYMTLASTTSTTTDNMSEKTVEMDMVATPGPTNTRNVSPMNQDFVDLSPVSNRHRHIPPSPNRPSYMTPTQSAKAKVRAQGPSKPRVSVGQWNFSTKGGSTGDSSSSGGRIVAYQFPRSPGPKINGIRSQSKRIVGSSPDYTEDWTLPLGAHGWA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1255 458 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 50 72 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 1 37 - -
Gso14g1255 458 Pfam Protein of unknown function (DUF4005) 352 389 IPR025064 -
Gso14g1255 458 PANTHER IQ-DOMAIN 21 1 440 - -
Gso14g1255 458 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Gso14g1255 458 Pfam IQ calmodulin-binding motif 142 157 IPR000048 GO:0005515
Gso14g1255 458 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Gso14g1255 458 MobiDBLite consensus disorder prediction 389 413 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 179 203 - -
Gso14g1255 458 Gene3D - 116 157 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 20 37 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 179 196 - -
Gso14g1255 458 MobiDBLite consensus disorder prediction 381 413 - -
Gso14g1255 458 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gso14g1255 458 MobiDBLite consensus disorder prediction 52 72 - -
Gso14g1255 458 SMART iq_5 114 136 IPR000048 GO:0005515
Gso14g1255 458 SMART iq_5 137 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1255 Gso-Chr14 30943768 30948457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1255 1 426 IQD Protein Family AT3G49260 48.802 1.10e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1255 - - gmx:100798026 786.178