Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1247 ATGGAACACTTGCAACTGAGCCAGACGTTAATGTTTGCATTGGCCCTCGTAGTAGTAGCTGTTGCACCTCATCAAACCCTTTCTGCAATACTAAACCAAAACCTCCCTGGCTGCAATTCCACTTGTGGAAATATTGAAATTCCATATCCATTCGGTATAGGCTACTCATCTACACCCGATCAACGACCCTGTTTCTTTGAGCCCAAGTTTAGTCTCACTTGCGAAAACTCCACATTAATATGGGGTAATGTCGAGATTTTAAGCATAAGCCTCCCAGCGCAGCAAATGGACGTATTGTTTTGGGTCTCACAGTTTTGCAATGACACAAATGACAACTTCCCCTGGATGCAAACATTCAACTTCAGCATTTCAAGGAAGGAAAACAAGTTCATGACCGTTGGCTGCGACAGTTTTGGCGTACTCAACAGTTTTTCCGACAATAGCACATATTCAACTGGGTGTCTAACAAGATGCTATGGCAACGAGTTGAAGATTGACGATGGAACGTGTTCCGGAATAGGGTGTTGCCGGATGGATATTCCTCCTCGAATGAGGGATATCGAGATAAGAGCATCTATCTTCTCCAATTCGATGCCAGAGTGGGAAAACTGCAGCTATTCCTTTGTTGCAAAACAAGACTCGTACAACTTTTCAACCTCTCATTTGCGAGGGTTTCCACAGACGAGCTTCCCCTTGGTTCTTGATTGGACCGTAGGACACCAAAAGTGTAAAGCATCCGAGAGTAGAGACGACTACGCATGCAGGAGCAATAGCTATTGCGATGACACAGACTCTGACATTGACTATGGTTACCGATGCAGATGTAAGGATGGCTATGAAGGAAACCCATATCTTGGCTGCACAGACATTGACGAATGTAAGACAGGCAATCATACATGCATAAGTGAAAAAAATTGTCTCAACTCCAATGGATCCCACCGATGTTTCTGTCCAAAGGGGCAATCCGGAAATGGAACAAAAGGAGTAGGGTGCCACCAAAAAGATTTAGTTACCAAGGTTGTCATGGGAGTAGGAGCAGGAATTTTTATTCTATTTATGGGGACTACTTTATTGTACTTGATATACCAGAAAAAGAAACTCATCAAACTTAGAGAGAAATACTTTCAGCAGAATGGCGGTTCCATTTTGCTACAGCAGCTCTCTAGAAGAGAAAATTCATCCCAGGTTACTCAAATTTTCACAGAAGAACAACTAAAGAAGGCCACCAACAACTTCGACGAGAGCTTGATCATTGGAAGTGGAGGTTATGGTACAGTTTTCAAAGGATTTCTAGCAGATAACAACAGAACTGTAGCTATCAAGAAGTCAAAAATAGTTGATGAGAGCCAAAAGGAACAATTCATTAACGAGATTATTGTTTTATCCCAAATCAATCACAGGAATGTGGTCAAACTCTTGGGTTGCTGTTTAGAGAGAGAAGTTCCTTTACTTGTTTATGAATTTGTTAATAATGGTACCCTTTATGATTTTCTACATACTGAAAGAAAGGTAAATAATGAAACTTGGAAAACCCGTCTGAGGATAGCAGCAGAGTCAGCTGGAGCACTATCATATCTGCACTCAGAAGCCTCAATACCAGTTATCCACAGAGATGTGAAGACTGCTAACATCCTCTTGGATAACACATACACTGCCAAAGTGTCCGATTTTGGAGCTTCAAGGTTGGTTCCACTTGATCAAACTGAAATAGCCACAATGGTGCAAGGAACTTTTGGCTACCTGGATCCGGAGTACATGCTTACAAGCCAACTAACGGAGAAAAGTGATGTCTACAGCTTTGGGGTGGTGCTTGTAGAGCTGCTAACAGGGGAGAAACCTCATTCTTTTGGCAAGCCAGAAGAGAAAAGAAGTCTTGCCAACCACTTTCTATCTTGCTTGAAAGAGGATCGCCTGTTTGATGTTTTTCAAGTTGGCATTGTGAATGAAGAAAATAAAAAGGAGATCGTGGAGGTTGCTATTCTTGCTGCAAAGTGCTTGAGACTCAATGGAGAGGAAAGGCCTAGCATGAAGGAAGTCGCAATGGAGTTGGATGCAATACGGCAAAAGGAGAAGCACCCATGGATCAGTGGAGACCAAAATATCGAGGAGACCCAATTCTTGCTTCATGATGCATCATCTAGCATTTATGCAGATGGTGATAGCAGCAGCCACCAATATACTACTGGGTATGACAGCATCAGGGATCATGTATTAATTGCATTGGATAATGGAAGATGA 2238 0.4236 MEHLQLSQTLMFALALVVVAVAPHQTLSAILNQNLPGCNSTCGNIEIPYPFGIGYSSTPDQRPCFFEPKFSLTCENSTLIWGNVEILSISLPAQQMDVLFWVSQFCNDTNDNFPWMQTFNFSISRKENKFMTVGCDSFGVLNSFSDNSTYSTGCLTRCYGNELKIDDGTCSGIGCCRMDIPPRMRDIEIRASIFSNSMPEWENCSYSFVAKQDSYNFSTSHLRGFPQTSFPLVLDWTVGHQKCKASESRDDYACRSNSYCDDTDSDIDYGYRCRCKDGYEGNPYLGCTDIDECKTGNHTCISEKNCLNSNGSHRCFCPKGQSGNGTKGVGCHQKDLVTKVVMGVGAGIFILFMGTTLLYLIYQKKKLIKLREKYFQQNGGSILLQQLSRRENSSQVTQIFTEEQLKKATNNFDESLIIGSGGYGTVFKGFLADNNRTVAIKKSKIVDESQKEQFINEIIVLSQINHRNVVKLLGCCLEREVPLLVYEFVNNGTLYDFLHTERKVNNETWKTRLRIAAESAGALSYLHSEASIPVIHRDVKTANILLDNTYTAKVSDFGASRLVPLDQTEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPHSFGKPEEKRSLANHFLSCLKEDRLFDVFQVGIVNEENKKEIVEVAILAAKCLRLNGEERPSMKEVAMELDAIRQKEKHPWISGDQNIEETQFLLHDASSSIYADGDSSSHQYTTGYDSIRDHVLIALDNGR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1247 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 713 IPR045274 GO:0007166
Gso14g1247 745 Gene3D Transferase(Phosphotransferase) domain 1 489 708 - -
Gso14g1247 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 31 713 - -
Gso14g1247 745 SMART egf_5 292 332 IPR000742 -
Gso14g1247 745 SMART egf_5 242 288 IPR000742 -
Gso14g1247 745 SMART egfca_6 289 332 IPR001881 GO:0005509
Gso14g1247 745 SUPERFAMILY Protein kinase-like (PK-like) 394 700 IPR011009 -
Gso14g1247 745 Pfam Protein kinase domain 416 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1247 745 Pfam Calcium-binding EGF domain 289 329 IPR001881 GO:0005509
Gso14g1247 745 ProSitePatterns Protein kinases ATP-binding region signature. 418 442 IPR017441 GO:0005524
Gso14g1247 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Gso14g1247 745 ProSitePatterns EGF-like domain signature 2. 273 287 IPR000742 -
Gso14g1247 745 SUPERFAMILY EGF/Laminin 288 326 - -
Gso14g1247 745 CDD STKc_IRAK 418 686 - -
Gso14g1247 745 ProSiteProfiles Protein kinase domain profile. 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1247 745 Gene3D Laminin 240 331 - -
Gso14g1247 745 SMART serkin_6 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1247 745 Gene3D Phosphorylase Kinase; domain 1 397 488 - -
Gso14g1247 745 ProSiteProfiles EGF-like domain profile. 289 332 IPR000742 -
Gso14g1247 745 Pfam Wall-associated receptor kinase galacturonan-binding 38 98 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1247 Gso-Chr14 30355272 30372074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1247 38 745 Receptor kinase-like Gene Family AT1G21230 45.703 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1247 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1247 - - gmx:100781051 1491.86