Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1245 ATGGCAAAGGGCACAAAACCCTTGTGGGTGTTGAGTAACTTTCTAATTTGTGATCTCCCCCTTCCAATGGAGTTAGTGATGAAACACTTGCAACTGCGGCGGGTGCTAATGGTCGCATTAGCCCTGGTAGTAGTAGCTGTTGCACCTCATCAAACACTTTCTGCCACTACACCAAAACAAGCCCTACCTGGCTGCAAATCCACTTGTGGAGATATCGAAATTCCATATCCATTCGGTATAGGCAACTCGTCTACGCCGGATCACCGATCCTGTTTCTTGGAGCCCAAGTTTAAACTTACTTGCAACAACTCCAGATTGATAGCGGGTAACATCACAGTTTCAAACATAAGCATCCTAGCTCACCAAATGGACGTATGGTTTTTCGTCGCAAAGGTTTGCAACGGAACAAACAGCACGATCCCCTGGCTGGGAACAGGCTATTTCAGCATCTCTAGCAAGGACAACAAATTACTAACTGTTGGTACCCATAGTTATGGATACGTCAACAGTTATTTCAACGGGGAGTCATATTCAACAGGGTGCTTAACGAGCACTCACGGCAACACAAGGAAGATCCAAAACGGTACGTGCTCGGGTATAGGGTGTTGCCAGGTGGATATTCCTACAGGGATGAGAAACATCACTGTACGTGCAGAATTTCTCGATAATGCAACGCAAAATTGGGGAAACTGCAGCTATTCCTTTGTTGTCAAGAATGGCTTTTATAATTTTTCTACCACTCATCTACGTAGTCTGACATACAAAACGCTTCCCTTGGTTCTTGATTGGACCATAGGAGACCGAAACTGCAAAGCAGCCAAGAAAAAAGACGACTATGCATGCAGGAACAATAGCGATTGCGATGACAAGGATTCTGGCTATGGTTATCGATGCAGATGTAATCATGGCTACCATGGAAACCCATACCTTCCAGATGGCTGCACAGACATTGACGAATGTAAGACCGCAAACCATACCTGCATAAGTAATAAAAATTGTCGCAACACCATCGGAAATTACACATGTTTCTGTCGTAAGTGGCAAACGGGAAATGGAAGAAAGGAAGGAGGTTGTCGCATACATACCATGGTAGTCATTGGAGCAGGAGTAGGATTTCTTATTCTATTTGGGGGGACTGCCATGACGTACTTAATATACCAGAAAAGGAAACTTGCCAAACTAAAAGAAAAGTTCTTTCAGCAGAATGGCGGTTTGATTTTGCTAAGAAAACTTTCTAGAAGAGAAGACACTTCCCAAACTACTCAAGTTTTCAAAGAAGAACAGCTAAAGAAGGCCACCAACAACTTTGATGAGAGCTCAATCATTGGGAAAGGAGGTTATGGTACAGTTTTCAAAGGATTTCTAGCAGATAGAAACAGAACTGTAGCTATCAAGAAGTCCAGAATAATTGATGAGAGCCAAAAGGAACAATTCATTAATGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTGGTCAAACTCTTGGGATGCTGTTTAGAGACAGAAATTCCTTTACTGGTTTATGAATTTGTTCAAAATGGTACCCTATACGAATTTATACACACTGAAAGAATGGTAAATAATGGAACTTGGAAAACTCGTCTAAGGATAGCAGCTGAGGCAGCCGGAGCTCTATGGTATTTGCACTCTGCAGCCTCAATAGCCATTATCCACAGAGATGTGAAGACTGCTAACATTCTCTTGGATGACACTTACACCGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAATTAGCCACAATGGTGCAAGGAACTTTTGGCTATCTGGATCCGGAGTACATGCTTACAAGCCAACTAACTGAGAAAAGTGATGTCTACAGCTTTGGGGTAGTGCTTGTAGAGCTACTGACAGGGGAGAAACCTCTTTCTTTTAGCAGGCCAGAAGAGGAAAGAAGTCTCGCTAACCACTTTCTATCATGCTTGAAAGAGGATCGCCTGATTGATGTTCTTCAATTTGGCCTTCTGAATGAAGAAAATAAAAAGGAGATCATGGAAGTCACTGTTCTTGCTGCAAACTGCTTAAGACTCAATGGGGAGGAAAGACCCAGCATGAAGGAAGTGGCAATGGAGTTGGAGGCAATAAGGCAAATGGAGAAACACCCATGGATCAATAGAGAGAAAAATCTGGAGGAGACTCAATACTTGCTTCATGATGCACCATCCAAGATTTATGAACATCGTGATAGCAGCAGCCTTCAATATAATGGCTATGACAGCATCAGGGATCATGTACTAATTGCCTTGGATAATGGAAGATGA 2307 0.4265 MAKGTKPLWVLSNFLICDLPLPMELVMKHLQLRRVLMVALALVVVAVAPHQTLSATTPKQALPGCKSTCGDIEIPYPFGIGNSSTPDHRSCFLEPKFKLTCNNSRLIAGNITVSNISILAHQMDVWFFVAKVCNGTNSTIPWLGTGYFSISSKDNKLLTVGTHSYGYVNSYFNGESYSTGCLTSTHGNTRKIQNGTCSGIGCCQVDIPTGMRNITVRAEFLDNATQNWGNCSYSFVVKNGFYNFSTTHLRSLTYKTLPLVLDWTIGDRNCKAAKKKDDYACRNNSDCDDKDSGYGYRCRCNHGYHGNPYLPDGCTDIDECKTANHTCISNKNCRNTIGNYTCFCRKWQTGNGRKEGGCRIHTMVVIGAGVGFLILFGGTAMTYLIYQKRKLAKLKEKFFQQNGGLILLRKLSRREDTSQTTQVFKEEQLKKATNNFDESSIIGKGGYGTVFKGFLADRNRTVAIKKSRIIDESQKEQFINEVIVLSQINHRNVVKLLGCCLETEIPLLVYEFVQNGTLYEFIHTERMVNNGTWKTRLRIAAEAAGALWYLHSAASIAIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTELATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPLSFSRPEEERSLANHFLSCLKEDRLIDVLQFGLLNEENKKEIMEVTVLAANCLRLNGEERPSMKEVAMELEAIRQMEKHPWINREKNLEETQYLLHDAPSKIYEHRDSSSLQYNGYDSIRDHVLIALDNGR* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1245 768 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 47 738 IPR045274 GO:0007166
Gso14g1245 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Gso14g1245 768 Gene3D Transferase(Phosphotransferase) domain 1 513 734 - -
Gso14g1245 768 Pfam Wall-associated kinase 195 301 IPR013695 GO:0004674|GO:0016021
Gso14g1245 768 ProSiteProfiles EGF-like domain profile. 316 351 IPR000742 -
Gso14g1245 768 CDD STKc_IRAK 442 710 - -
Gso14g1245 768 SMART egfca_6 316 359 IPR001881 GO:0005509
Gso14g1245 768 SUPERFAMILY Protein kinase-like (PK-like) 419 728 IPR011009 -
Gso14g1245 768 Pfam Wall-associated receptor kinase galacturonan-binding 65 123 IPR025287 GO:0030247
Gso14g1245 768 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 47 738 - -
Gso14g1245 768 SMART egf_5 269 315 IPR000742 -
Gso14g1245 768 SMART egf_5 319 359 IPR000742 -
Gso14g1245 768 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 333 344 IPR000152 -
Gso14g1245 768 SMART serkin_6 436 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1245 768 SUPERFAMILY EGF/Laminin 316 351 - -
Gso14g1245 768 Pfam Calcium-binding EGF domain 316 354 IPR001881 GO:0005509
Gso14g1245 768 ProSitePatterns Calcium-binding EGF-like domain signature. 316 342 IPR018097 GO:0005509
Gso14g1245 768 ProSiteProfiles Protein kinase domain profile. 436 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1245 768 Gene3D Phosphorylase Kinase; domain 1 406 512 - -
Gso14g1245 768 Gene3D Laminin 268 319 - -
Gso14g1245 768 Pfam Protein kinase domain 437 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1245 768 ProSitePatterns Protein kinases ATP-binding region signature. 442 466 IPR017441 GO:0005524
Gso14g1245 768 Gene3D Laminin 320 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1245 Gso-Chr14 30278969 30291786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1245 37 768 Receptor kinase-like Gene Family AT1G21230 43.065 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1245 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1245 - - gmx:100778914 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1245 14 30278969 30291786 Gso13g0198 13 11059025 11063459 GST
Gso14g1245 14 30278969 30291786 Gso4g2043 4 50811892 50824666 PCT
Gso14g1245 14 30278969 30291786 Gso6g1008 6 9781614 9792584 PCT
Gso4g2043 4 50811892 50824666 Gso14g1245 14 30278969 30291786 PCT
Gso6g1008 6 9781614 9792584 Gso14g1245 14 30278969 30291786 PCT