Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1244 ATGGACTTGCTTTTCAATATATCCCACATTTGCAAAAGCAGAAGTGGAAAGGGTTTAAGAAGGGGCCCAGCATTCACGCTCAAATGTCAGGCTTTTTCCATTTCCAGCGAGGACAACGAGTTCGTAACTGTAGGCTGCGACACTTATGGCCATCTCCACTCTTTTCTCAATGGTACGAAATCTTCAATAGGATGCTTGATGAGATGTGTCAGCAAGGAAAGTGTGCAAAGCATGCAAAGACAGGAAAACTGTACAGGGATAGGGTGTTGGAAGATCAATATACCTACTGGAATGAAGGATATTATGATACAAGCATTCAACTATGACAATTTCAATTACTCCTCCGACTTCAACAACTTTCTCTGTTATTTTTATTCTGAATTTGCAGACATTGACGAATGTAAGACAACCAATCATACATGCATAAGCCAAAACAATTGTCTCAACACCAATGGATCCTACGAATGTTTCTGTCCAAAGGGGCGATCCGGAAATGGAAAAAAGGAAGAAGGGTGCCACCAAAAAGATGTTACCAAGGTTGTCATAGGAGTAGCAGCAGGAATTGTTATTCTATGTGTAGGGACTACCTCATTGTACTTGATATACCAGAAAAGAAAACTCAACAAACTTAGACAGAAATACTTTCAACAGAATGGTGGTTCCATTTTGCTACAGAAACTCTCTACAAGAGAAAACTCTTCCCAAATTCAAATTTTCACACAACAAGAACTAAAGAAGGCCACTAACAACTTTGACGAGAGCTTAATCATTGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGGCATCTAGCGGATAACAGAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATAAGAGCCAAAGTGAACAATTTGCTAACGAGGTGATTGTTCTATCCCAAATCAATCATAGAAATGTGGTCAAACTCTTGGGATGCTGTTTAGAGACAGAAGTTCCTTTACTTGTTTATGAATTTGTTAACAATGGTACCCTTTTCGATTTCATACACACCGAAAGAAAGGTAAATGATGCGACTTGGAAAACCCGTGTAAGGATAGCAGCCGAGGCGGCTGGAGCTCTATCATATCTACATTCAGAAGCATCAATACCCATTATCCACAGAGATGTAAAGTCTGCTAACATCCTGTTAGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCTAGATTTATTCCACTTGATCAAACTGAATTAGCTACAATCGTGCAAGGAACTATTGGTTACTTGGACCCAGAGTACATGCAAACAAGCCAACTAACTGAGAAAAGTGATGTATATAGCTTTGGGGCAGTGCTTGTAGAGATGTTAACAGGGGAGAAGCCTTATTCTTTTGGCAGGCCTGAGGAGAAAAGAAGTCTTGCTAACCACTTTCTATGTTGCTTAAAAGAGGATCGCCTGTTCGATGTTCTTCAAGTCGGCATTTTGAATGAAGAAAATGAAAAGGAGATTAAGAAAGTTGCTATTCTTGCTGCGAAGTGCTTGAGAGTTAATGGGGAGGAAAGACCTAGTATGAAGGAAGTGGCGATGGAGTTGGAGATGCATCAGTGGATTAATACAGACCCAAATGTAAAGGAGACTGATTACTTGGTTCATGAGGCATCATCTAACATTTATGAGCCTGGTGATAGCAGCTGCCATCAAGAGTATGACAGCATTACGGATCAAATACCACCTGCTTTGGGTGATGGAAGATGA 1725 0.4023 MDLLFNISHICKSRSGKGLRRGPAFTLKCQAFSISSEDNEFVTVGCDTYGHLHSFLNGTKSSIGCLMRCVSKESVQSMQRQENCTGIGCWKINIPTGMKDIMIQAFNYDNFNYSSDFNNFLCYFYSEFADIDECKTTNHTCISQNNCLNTNGSYECFCPKGRSGNGKKEEGCHQKDVTKVVIGVAAGIVILCVGTTSLYLIYQKRKLNKLRQKYFQQNGGSILLQKLSTRENSSQIQIFTQQELKKATNNFDESLIIGKGGFGTVFKGHLADNRIVAIKKSKIVDKSQSEQFANEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDFIHTERKVNDATWKTRVRIAAEAAGALSYLHSEASIPIIHRDVKSANILLDDTYTAKVSDFGASRFIPLDQTELATIVQGTIGYLDPEYMQTSQLTEKSDVYSFGAVLVEMLTGEKPYSFGRPEEKRSLANHFLCCLKEDRLFDVLQVGILNEENEKEIKKVAILAAKCLRVNGEERPSMKEVAMELEMHQWINTDPNVKETDYLVHEASSNIYEPGDSSCHQEYDSITDQIPPALGDGR* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1244 574 Gene3D Laminin 130 172 - -
Gso14g1244 574 ProSitePatterns Protein kinases ATP-binding region signature. 257 280 IPR017441 GO:0005524
Gso14g1244 574 CDD STKc_IRAK 257 522 - -
Gso14g1244 574 Pfam Protein kinase domain 255 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1244 574 ProSiteProfiles Protein kinase domain profile. 251 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1244 574 ProSitePatterns Calcium-binding EGF-like domain signature. 130 156 IPR018097 GO:0005509
Gso14g1244 574 SMART serkin_6 251 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1244 574 Gene3D Phosphorylase Kinase; domain 1 224 326 - -
Gso14g1244 574 PANTHER NON-FUNCTIONAL PSEUDOKINASE ZED1-LIKE 124 528 - -
Gso14g1244 574 PANTHER NON-FUNCTIONAL PSEUDOKINASE ZED1-LIKE 27 107 - -
Gso14g1244 574 SUPERFAMILY Protein kinase-like (PK-like) 231 524 IPR011009 -
Gso14g1244 574 ProSiteProfiles EGF-like domain profile. 130 173 IPR000742 -
Gso14g1244 574 Gene3D Transferase(Phosphotransferase) domain 1 327 542 - -
Gso14g1244 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Gso14g1244 574 MobiDBLite consensus disorder prediction 550 574 - -
Gso14g1244 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 124 528 IPR045274 GO:0007166
Gso14g1244 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 107 IPR045274 GO:0007166
Gso14g1244 574 SUPERFAMILY EGF/Laminin 130 165 - -
Gso14g1244 574 SMART egfca_6 130 173 IPR001881 GO:0005509
Gso14g1244 574 Pfam Calcium-binding EGF domain 130 172 IPR001881 GO:0005509
Gso14g1244 574 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 147 158 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1244 Gso-Chr14 30258849 30264673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1244 130 540 Receptor kinase-like Gene Family AT1G21230 52.693 4.84e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1244 Pkinase 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1244 - - gmx:106795885 1100.89