Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1243 ATGCCGTACTTAATATACCAAAAAAGGAAGCTCGTCAAACTAAAAGAGAAATTCTTTCAGCAAAATGGTGGTTTGATTTTGTTACAGAAACTCTCTACATCGGAAAAGTCCTCCCGTTTTATGCAAATTTTCACAGAAGAAGAACTAAAGAAGGCCACCCGCGATTTTGATGAGAGTTCAATCGTTGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGATTTCTAGAAGATAACAGAACTGTAGCTATCAAGAAATCCAAAATAGTTGATGACAACCAAAAGGAACAATTCATTAATGAGGTGATTGTTCTATCCCAAATCAACCATAGGAATGTGGTCAGACTCTTGGGATGTTGTTTAGAGACAAAAGTTCCTTTATTGGTATATGAATTTGTTAACAATGGCACCCTTTTTGATTTGATACACACTGAAAGAACCGTGAATGGTGCAACTTGGAAAACACGTGTAAGGATAGCAGCAGAGGCCGCTGGAGCTCTATCATATCTGCACTCAGAAGCCTCAATTCCCATTATCCACAGAGATGTGAAGACTGCTAACATCCTCTTGGATAACACTTACACTGCCAAAGTGTCGGATTTTGGAGCTTCAATATTGATTCCACTTGATCAAACTGCATTATCCACATTTGTGCAAGGAACTTTTGGCTATTTAGACCCAGAGTACGTGCAAACAGGCCAACTAACGGAGAAAAGTGATGTGTACAGCTTTGGGGCAGTGCTTATAGAGCTGTTAACAGGGGAGAAACCTTATTCCTTTGGCAAGCCTGGAGAGAAAAAAAATCTAGCCAACCACTTTCTATCTAGCTTGAAAGAGGATCGCCTAGTTGATGTTCTACAAGTTGGAATTTTGAATGAAGAAAATGAAAAGGAGATTAAGAAGGTAGCTTTTCTTGCTGCAAAGTGCTTGAGACTTAAAGGGGAAGAAAGGCCTAGCATGAAGGAAGTTGCAATAGAGTTGCAGAAGCATCACTTGATTAATACAGACCCAAATCAAAAGGAGAATGAATACCAGCTGGTTCATGAGGCACCATCTAACATTTATGAGTCCGGTGATAGCAACAGCCATCAAGGGCTTGGCAGCATTGGGGATCAAGTACTAGCTGCTATGAATGATGGAAGATGA 1143 0.4016 MPYLIYQKRKLVKLKEKFFQQNGGLILLQKLSTSEKSSRFMQIFTEEELKKATRDFDESSIVGKGGFGTVFKGFLEDNRTVAIKKSKIVDDNQKEQFINEVIVLSQINHRNVVRLLGCCLETKVPLLVYEFVNNGTLFDLIHTERTVNGATWKTRVRIAAEAAGALSYLHSEASIPIIHRDVKTANILLDNTYTAKVSDFGASILIPLDQTALSTFVQGTFGYLDPEYVQTGQLTEKSDVYSFGAVLIELLTGEKPYSFGKPGEKKNLANHFLSSLKEDRLVDVLQVGILNEENEKEIKKVAFLAAKCLRLKGEERPSMKEVAIELQKHHLINTDPNQKENEYQLVHEAPSNIYESGDSNSHQGLGSIGDQVLAAMNDGR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1243 380 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Gso14g1243 380 SMART serkin_6 56 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1243 380 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 3 344 - -
Gso14g1243 380 Gene3D Phosphorylase Kinase; domain 1 30 131 - -
Gso14g1243 380 ProSiteProfiles Protein kinase domain profile. 56 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1243 380 SUPERFAMILY Protein kinase-like (PK-like) 33 325 IPR011009 -
Gso14g1243 380 Pfam Protein kinase domain 57 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1243 380 CDD STKc_IRAK 62 328 - -
Gso14g1243 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Gso14g1243 380 Gene3D Transferase(Phosphotransferase) domain 1 132 352 - -
Gso14g1243 380 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 344 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1243 Gso-Chr14 30213899 30215505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1243 7 343 Receptor kinase-like Gene Family AT1G21230 58.457 9.57e-136 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1243 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1243 - - gmx:100776778 729.554