Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1241 ATGTGCAGGGTGCTAATGCTTGCATTAGCCCTGGTAGTAGTAATAGTAGCTATTGCACCTCATCAAACCCTTTCTGCACCACTAAACAGAACACTGCCTGGATGCAAATCCACTTGTGGAAATGTCGAAATTCCATATCCATTTGGTATAGGCAACTCATCTACACCCGATCAACGACCCTGTTTCTTGAAGCCCGTATTTAATCTTGCTTGCAATAACTCCACGTTAAAATGGGGTACGGTCACAGTTTTAAACATAAGCGTCCCAGCTCATCAAGTGGACGTATTGCAATTGGTTTCATGGTTTTGTAATAGCGAAGATTACTGGGAGACTTGGTTGACAACTGGTATATCCAGAATTTCAAGGAAGGAAAACAAGTTCATAACTGTAGGTTGCGACAGTTACGGCAATCTCAATAGCGTTTATAATGACAAAACATATACAACAGGGTGCTTAACAAGATGTTATGGCAATGCTTTGGTGATTGATGATGGAACATGCTCAGGTATAGGGTGTTGCCAGGTTGATATTCCTCCTCGAATGACTAATATCACTATAAAAGCATTTGCCTTCACAACCTCAAGGAGAAATATCAGCATAAATAATGCCTCTGTCATCTCCAATTCAACCTGCAGTTATTCCTTTGTTGTCAAAAATGGCTTTTATAATTTTTCTACCACTCATTTAAAAAGTTTCCCAAACAAGACGCTACCGTTGGTTCTTGATTGGACCGTGGGAAACAAAAGCTGTGACGATTCCAAAAGTAGAGGCGACTACGCGTGCAAGGAGAATAGCTATTGCGACGACAAGGACAGTGATTATGGTTACCGATGCATGTGTCGGGATGGTTATGAAGGAAATCCATATCTTGGCTGCATAGACATTGACGAATGTAAGACAGGCCATCATACATGCGTAAGTGAAAAATATTGTCTCAACACCAATGGATCGCACAAATGTTTCTGTCCAAAGGGGCAATCCGGAAATGGAACAAAGGAAGAAGGGTGCCACAAAAAAGATGTAGTTACCAAGGTTGTCATAGGAGTCGCAGCAGGAACTATTATTTTAGTTGTGGGGACTACCTTACTGTACTTGATATACCAGAAAAGAAGACTCAACAAACTCAGAGAGAAATACTTTCAGCAGAATGGTGGTTCCATTTTGCTACAGAATCTCTCTACAAGAGAAAACTCCTCCCAAATTCAAATTTTCACAGAAGAACAACTAAAGAAGGCCACCAACAACTTTGACGAGAGCTTAATCATTGGTAAAGGAGGTTTTGGTACAGTTTACAAAGGTCATCTAGCAGATAACAGAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATAAGAGCCAAAATGAACAATTTGCTAACGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTTGTCAAGCTCTTGGGATGTTGTTTAGAGACAGAAGTTCCATTACTGGTTTATGAATTTGTTAATCATGGCACCCTATTTGATTTTATACACACCGAAAGAAACATAAATGATGCAACTTGGAAAACCCGTGTAAGAATAGCAGCAGAGGCAGCTGGAGCTCTATCATATCTGCATTCAGAAGCCTCAATACCCATTATCCACAGAGATGTGAAGACTGCTAACATCCTCTTGGATAACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTCGTCCCTCTTGATCAAACTGAAATAGCAACAATGGTGCAAGGAACTTTTGGTTACCTGGATCCAGAGTACATGCGTACAAGCCAACTAACTGAGAAAAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAGCTGCTAACAGTGGAGAAACCATATTCATTTGGCAAGCCAGAAGAGAAAAGAAGTCTCACTAACCACTTTTTATCTTGCTTGAAAGAGGGTCGCCTATCTGATGTTGTTCAAGTTGGCATTATGAATGAAGAAAATAAAAAGGAGATCATGGAGTTTTCTATTCTTGCTGCAAAGTGCTTGAGACTCAATGGGGAGGAACGACCTAGCATGAAGGAAGTGGCAATGGAGTTGGAAGGGATGCGGCTAACTGAGAAGCATCCTTGGATCAATACATTTCAAAATCCAGAGGAGGCTCACTTGCTTCAAAAGGGATCATCTAGCGTCTGTGAACCTGGTGATAGCAGCAGCCATCAATATACTATTGGGTATGACAGCATTAATGATCATGTACAAATTGCTTTTGATGATGGAAGATGA 2244 0.406 MCRVLMLALALVVVIVAIAPHQTLSAPLNRTLPGCKSTCGNVEIPYPFGIGNSSTPDQRPCFLKPVFNLACNNSTLKWGTVTVLNISVPAHQVDVLQLVSWFCNSEDYWETWLTTGISRISRKENKFITVGCDSYGNLNSVYNDKTYTTGCLTRCYGNALVIDDGTCSGIGCCQVDIPPRMTNITIKAFAFTTSRRNISINNASVISNSTCSYSFVVKNGFYNFSTTHLKSFPNKTLPLVLDWTVGNKSCDDSKSRGDYACKENSYCDDKDSDYGYRCMCRDGYEGNPYLGCIDIDECKTGHHTCVSEKYCLNTNGSHKCFCPKGQSGNGTKEEGCHKKDVVTKVVIGVAAGTIILVVGTTLLYLIYQKRRLNKLREKYFQQNGGSILLQNLSTRENSSQIQIFTEEQLKKATNNFDESLIIGKGGFGTVYKGHLADNRIVAIKKSKIVDKSQNEQFANEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNHGTLFDFIHTERNINDATWKTRVRIAAEAAGALSYLHSEASIPIIHRDVKTANILLDNTYTAKVSDFGASRFVPLDQTEIATMVQGTFGYLDPEYMRTSQLTEKSDVYSFGVVLVELLTVEKPYSFGKPEEKRSLTNHFLSCLKEGRLSDVVQVGIMNEENKKEIMEFSILAAKCLRLNGEERPSMKEVAMELEGMRLTEKHPWINTFQNPEEAHLLQKGSSSVCEPGDSSSHQYTIGYDSINDHVQIAFDDGR* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1241 747 Gene3D Laminin 248 336 - -
Gso14g1241 747 SMART egf_5 297 337 IPR000742 -
Gso14g1241 747 SMART egf_5 249 293 IPR000742 -
Gso14g1241 747 Gene3D Transferase(Phosphotransferase) domain 1 492 707 - -
Gso14g1241 747 SUPERFAMILY Protein kinase-like (PK-like) 395 687 IPR011009 -
Gso14g1241 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 710 IPR045274 GO:0007166
Gso14g1241 747 SMART serkin_6 416 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1241 747 Pfam Wall-associated receptor kinase galacturonan-binding 35 95 IPR025287 GO:0030247
Gso14g1241 747 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Gso14g1241 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 28 710 - -
Gso14g1241 747 Pfam Protein kinase domain 420 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1241 747 CDD STKc_IRAK 422 689 - -
Gso14g1241 747 Pfam Calcium-binding EGF domain 294 336 IPR001881 GO:0005509
Gso14g1241 747 SUPERFAMILY EGF/Laminin 292 329 - -
Gso14g1241 747 SMART egfca_6 294 337 IPR001881 GO:0005509
Gso14g1241 747 ProSiteProfiles Protein kinase domain profile. 416 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1241 747 Gene3D Phosphorylase Kinase; domain 1 389 491 - -
Gso14g1241 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Gso14g1241 747 ProSiteProfiles EGF-like domain profile. 294 337 IPR000742 -
Gso14g1241 747 ProSitePatterns EGF-like domain signature 2. 278 292 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1241 Gso-Chr14 30189578 30193243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1241 8 747 Receptor kinase-like Gene Family AT1G21230 44.503 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1241 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1241 - - gmx:100775699 1510.35