Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1240 ATGAAGGCCATGCAGATGCAATCGATCACCATACTGTTGCTGACTGCGTTAGCAGTAGCAGCTGACCAAGCCCTGCCCGGCTGCCCGAACTCTTGCGGAAGCGTTTCACAAATTCCGTATCCATTTGGCATAGGCAAATCTTCCGTCACCGGTGAAAACTGTTTCTTGGAGGACCAATTGGAGCTCACTTGCAGAGATTCCACTTTATATCGCGGAAACGGCAACGTCCAAATTCTGAACATAACCCTCGACGGTAAAATGGACATGCTCGCCTTCGTCTCGAAGGTTTGCAGAAAAGAATCTCTTGGTGGAGTAGAAACAGAAGGTAACGAACCCAGTCTCACAACTCCGGCTTTCGCCATTTCCAGCGAGGACAACAAGTTCGTAAGCGTGGGGTGCGACACTAATGGCTATCTCAACAGTTATCGCAATGGTGCGAAATCTTCAGTGGGGTGTTTGACAAGATGTAACAGCGAAGCCAGTGTGCAAATCATGCAGAGAGATGGAAACTGTACGGGGATAGGGTGTTGTCAGGTGGATATACCTCCCGGAATGATGAATATTACCATACAAGCATTTAGCTTTAACAATTTCAATTCCTCTTCTGACTTCAACAACTGCAGCTATTCCTTTGTCATAAAAAATGACAACTATACTTTCTCAATGGATCATTTAAAGGGTCTTCCGTTCCAAAAGGCACCCTTTGTTGTAGATTGGACTGTTGGAAATCAGACATGTTTCAATTCCACGAGTAAAACCGACTATGCATGTAAGAGTAATAGCTATTGTGAGGACTCGGCTATTAGAAAAAGTTACCGATGCAAATGTAAAGAAGGTTATGAGGGAAACCCGTACCATCCGGATGGTTGCCAAGACATTTTAGAATGTACGAATGGTCGGAACAATTGCGCAAGAGATGAATATTGTCGTGAAACCCTTGGATCTTTCCAATGTTTCTGTCCTGAAGGACTTATCGGAAATGGAACAAAAGAAGATGGAGAATGTCGACAAAAGCAGCGAAATGACGTATTTACCAAAGTCGCCATTGGTGGAGGTGTAGGATTAATTGCTCTATTTATGGGGATTTCTTGGGTATACTTGATAAAGCAGAAAAGGAAAGTCCTCAAATTAAAGGAGAAGTTCTTTCAGCAAAATGGGGGCATCATTCTAAGACAGCAACTCTCTACAAGGAAAGACTCGTCTCAATCAACTACAATTTTCACTGCAGAGCAACTTGAAAAAGCAACCAACTATTTTGATGAGAAATTAGTCATTGGTAAAGGAGGTTATGGTACAGTTTTTAAAGGATTTCTGTCGGATAACAGGGTCGTTGCTATCAAAAAGTCCAAAATAGTGGATCAGAGCCAAATAGAGCAATTTATTAATGAGGTCATTGTATTATCACAAATTAATCACAGGAATGTGGTCAAACTGTTGGGTTGTTGTCTAGAGACAGAAGTTCCTTTACTAGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATTATTTACACAATGAACACAAGGTGGCTAATGTATCCTGGAAAACCCGCCTAAGGGTAGCAACAGAGGTAGCTGGAGCTCTATCATATCTACACTCAGCAGCCTCCATACCCATCATTCACAGAGATGTGAAGACTGCCAACATACTCTTAGATGATACTTACACTGCCAAAGTGTCTGATTTTGGTGCTTCAAGATTGGTTCCACTTGACCAAACTGAATTAGCCACAATCGTGCAAGGAACCTTTGGGTATTTAGACCCAGAGTACATGCAAACAAGCCAATTGACTGAAAAAAGTGACGTTTATAGCTTTGGCGTAGTGCTTGTAGAACTGTTAACAGGAGAAAAACCTTTCTCTTTTGACAGGTCTGAAGAGAAACGAAGTCTTACAGTTCATTTTCTTTCTTGCTTGAAAGGTGATCGCTTATTTGAAGTTCTTCAAATCGGAATTTTGGATGAAAAAAATAAACAAGAGATCATGGATGTTGCTATTCTTGCTGCAAAGTGCTTGAGACTTAGAGGAGAAGAAAGGCCTAGCATGAAAGAAGTAGCAATGGCGTTGGAAGGAGTAAGAAGAATGGAGAAACACCCATGGACCAATAAAAGCCAAAATTTCCAGGAGACTCAATACTTGCTTCATGAGGCATATAGCACTCGTGAACATGGTGATAGTAGTGACCTTCAAAGTACTGGATATGACAGCCTGAGAAATCTTGAATTAATAGACTTTGGTGATGGAAGATGA 2250 0.4138 MKAMQMQSITILLLTALAVAADQALPGCPNSCGSVSQIPYPFGIGKSSVTGENCFLEDQLELTCRDSTLYRGNGNVQILNITLDGKMDMLAFVSKVCRKESLGGVETEGNEPSLTTPAFAISSEDNKFVSVGCDTNGYLNSYRNGAKSSVGCLTRCNSEASVQIMQRDGNCTGIGCCQVDIPPGMMNITIQAFSFNNFNSSSDFNNCSYSFVIKNDNYTFSMDHLKGLPFQKAPFVVDWTVGNQTCFNSTSKTDYACKSNSYCEDSAIRKSYRCKCKEGYEGNPYHPDGCQDILECTNGRNNCARDEYCRETLGSFQCFCPEGLIGNGTKEDGECRQKQRNDVFTKVAIGGGVGLIALFMGISWVYLIKQKRKVLKLKEKFFQQNGGIILRQQLSTRKDSSQSTTIFTAEQLEKATNYFDEKLVIGKGGYGTVFKGFLSDNRVVAIKKSKIVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNEHKVANVSWKTRLRVATEVAGALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTELATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDRSEEKRSLTVHFLSCLKGDRLFEVLQIGILDEKNKQEIMDVAILAAKCLRLRGEERPSMKEVAMALEGVRRMEKHPWTNKSQNFQETQYLLHEAYSTREHGDSSDLQSTGYDSLRNLELIDFGDGR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1240 749 Gene3D Transferase(Phosphotransferase) domain 1 495 718 - -
Gso14g1240 749 SUPERFAMILY Protein kinase-like (PK-like) 398 689 IPR011009 -
Gso14g1240 749 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1240 749 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Gso14g1240 749 Gene3D Phosphorylase Kinase; domain 1 385 494 - -
Gso14g1240 749 Gene3D Laminin 241 335 - -
Gso14g1240 749 SMART serkin_6 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1240 749 ProSiteProfiles EGF-like domain profile. 292 330 IPR000742 -
Gso14g1240 749 SUPERFAMILY EGF/Laminin 291 327 - -
Gso14g1240 749 Pfam Protein kinase domain 421 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1240 749 SMART egf_5 295 336 IPR000742 -
Gso14g1240 749 SMART egf_5 245 291 IPR000742 -
Gso14g1240 749 Pfam Calcium-binding EGF domain 292 327 IPR001881 GO:0005509
Gso14g1240 749 CDD STKc_IRAK 425 691 - -
Gso14g1240 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 718 IPR045274 GO:0007166
Gso14g1240 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Gso14g1240 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 15 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1240 Gso-Chr14 30124536 30128185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1240 1 749 Receptor kinase-like Gene Family AT1G21230 44.241 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso14g1240 Pkinase 6.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1240 - - gmx:100819535 1477.61