Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1226 ATGAAAATGCTGCCATCTGCCACCGCCGGAGATGCCGGACACGGCAGTGCCGGTGACCGCATCGTGGTGGTGGGCATGAAGATGGACTCCCACAGCACCGAGTTGCTCACTTGGGCTCTGTTCAAAGTGGCTCAACCCGGTGATGTTGTGCTTGCTCTTCATGTTCTCGGGAATGATGAAATTGTGAATCGAGAAGGGAAATCCTCTTTGTTTTCACTTGTCAAAGCATTTGACTCTATCCTTGCTGTTTATGAAGGGTTCTGCAATTTGAAGCAGGTGGATCTCAAGTTCAAAATATGCCGGGGTTCATCAGTGACGAGAATTTTGGTTCGAGAAGCAAATGCTTATTCTGCAACACACATCATAGTTGGAAGTTCTCAAGGTCTTCATATAACTCGGCCATGCATATCTGTGGCAAGGTACTGTGCTAAGAAGTTACCAAAGGATTGTTGGGTTTTTGCTGTTGATAACGGGAAAATCGTGTTCAAGAGAGAAGGGTCAGCCGCAACTCGTTCAGACTTAAAAGGACTTGATCGGGATCACAAAACCGGGTTGCTCGGTTCGATTCACAGGACAATCAGCAAGAGTTCAAAAGTGCTAGATGATGATGGCACGGGGATGCACGAAAAGGGTAGTGGTGAATATTCAGATCACAGTTTGGCCAAGGCTTTTCTGGATTCTAAAGAATTCATTGAGAAGAAGAGGTGCTCTACTAGTGCTTCAGAAGAAGAAGAATCTTGTGCTGATGCTTGTGATGAGATGAACCCATTGGCAATAGTGCCTGTGCAGACCAATGATGCTGCTTCTAAACCGGGTTGGCCCCTGCTTCGTAAGACAATTGTATCTGACAGGAAATGTTCTCAAAGATCGCTCTTGTGCCAGATCTCGGTGGTACAATGGGCAATGCAGTTACCCTCTAGAGATCTTTCATATGCTGCACATCAAGACCATAAAACAAACAATTGTGGCCCAAATAAGGATCAGTTTCTGGCCCTTGATAGCAAGAGTGGTGCTCTTGTTCCGGTGGATGCTGAAATAGGGACTGCTCCTTCGACTGAACACAATTCAAGAAGCATTCCTAAGGAATTGGAGGGCCTTCATGAGAAATACTCATCCACTTGCAGATTGTTCAAGTACCAAGAACTTGTATTGGCAACATCAAATTTTTTGCCAGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCTTAAAGCCATCTGATGATGTTTTGAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACCTTAAATCACAAAAGCTTAATTTCCCTCCTTGGATTTTGCTTTGAGGATGGCAATCTTCTTTTGGTTTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTCCATGGTAATAAGAAAAATCCACTTATGTTTGGTTGGACTGAGAGATATAAGGTGGCAATAGGTGTTGCTGAGGCTTTGGAGTATCTGCATAATAATGATGGCCAATCTGTGATCCATCGCGATGTGAAATCATCAAATGTTTTGTTATCTGAGGATTTTGAGCCCCAGCTCTCTGACTTTGGACTTGCTAAATGGGCGTCGACCACTTCATCACATATAATCTGCACCGATGTTGCTGGAACCTTTGGTTACATGGCTCCTGAATACTTCATGTACGGTAAAGTAAATGACAAGATTGATGTCTATGCATTTGGTGTAGTGCTTCTTGAGCTTCTTTCTGGAAGAAAGCCCATAAGTGGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGAAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATAATCATGAAGAGATGGAAAGGATGGTCTTGGCAGCCACACTTTGTACCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATCTCTAAGCTCCTTGGAGGTGATCCTGATGTGATCAAGTGGGCAAGACTAGAAGTTAATGCTTTGGAAGCACCAGAAATGCTTGATGATGAAGCTTGTCCACCTTCCAATTTGCAGTCTCATCTCAACCTTGCACTGCTTGACGTGGAGGACGACTCGCTCTCCATGTGCAGTGTCGAGCAAAACGTCTCGTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGCTCATCAAGCTTTGATTAA 2208 0.4407 MKMLPSATAGDAGHGSAGDRIVVVGMKMDSHSTELLTWALFKVAQPGDVVLALHVLGNDEIVNREGKSSLFSLVKAFDSILAVYEGFCNLKQVDLKFKICRGSSVTRILVREANAYSATHIIVGSSQGLHITRPCISVARYCAKKLPKDCWVFAVDNGKIVFKREGSAATRSDLKGLDRDHKTGLLGSIHRTISKSSKVLDDDGTGMHEKGSGEYSDHSLAKAFLDSKEFIEKKRCSTSASEEEESCADACDEMNPLAIVPVQTNDAASKPGWPLLRKTIVSDRKCSQRSLLCQISVVQWAMQLPSRDLSYAAHQDHKTNNCGPNKDQFLALDSKSGALVPVDAEIGTAPSTEHNSRSIPKELEGLHEKYSSTCRLFKYQELVLATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLNHKSLISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKNPLMFGWTERYKVAIGVAEALEYLHNNDGQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTTSSHIICTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPILNSGKVLQLLDPSLGDNYNHEEMERMVLAATLCTRRAPRARPQMSLISKLLGGDPDVIKWARLEVNALEAPEMLDDEACPPSNLQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1226 735 CDD USP_Like 22 152 - -
Gso14g1226 735 Pfam Universal stress protein family 20 152 IPR006016 -
Gso14g1226 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Gso14g1226 735 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 10 729 - -
Gso14g1226 735 ProSiteProfiles Protein kinase domain profile. 389 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1226 735 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Gso14g1226 735 Gene3D HUPs 20 155 IPR014729 -
Gso14g1226 735 SUPERFAMILY Protein kinase-like (PK-like) 370 658 IPR011009 -
Gso14g1226 735 Gene3D Transferase(Phosphotransferase) domain 1 464 665 - -
Gso14g1226 735 Gene3D Phosphorylase Kinase; domain 1 351 463 - -
Gso14g1226 735 Pfam Protein kinase domain 393 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1226 735 SMART serkin_6 389 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1226 735 PANTHER OS01G0253100 PROTEIN 10 729 IPR045271 GO:0004714|GO:0006468
Gso14g1226 735 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1226 Gso-Chr14 29099200 29103715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1226 376 656 Trihelix Transcription Factor Family AT1G68690 46.154 1.01e-74 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso14g1226 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1226 - - gmx:100305405 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1226 14 29099200 29103715 Gso13g0185 13 10723880 10728389 GST
Gso14g1226 14 29099200 29103715 Gso4g1771 4 47827034 47830577 PCT
Gso14g1226 14 29099200 29103715 Gso6g1307 6 12779330 12783091 PCT
Gso4g1771 4 47827034 47830577 Gso14g1226 14 29099200 29103715 PCT
Gso6g1307 6 12779330 12783091 Gso14g1226 14 29099200 29103715 PCT