Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1219 ATGATCCTTCCCTTGTTCATGTCTCTCTTCACTATTTTCGTAGCTGGTGTTGCATCTTCCTCATGCCCCATGGATCTCACCTATGTTGAGACCATTCCTTGGAACACTTCAGTCTGCAGAGACCCAATTGACAAAGATTCCTGCTGCCAAACTCTGTCCAGTATCTACGCCATAGGCCTTGCTGAACGCCTCAAAGAGAATTCCATATTTTACCTTCCTGATGTAAACACTTCCTCCACTTGCTTATCTGACTTCAAAGATCACCTTGCAGCTTTGTCAATCCAACCAAAGATGGTGTCTCTTTGCTTCCCTAACCCCACCCAGTTTGTTACTAACTCTTCAGCTTGTGCAGGTATTAGAACTACACAAGATTGGAAGCAAAAGGTGGGCATGGTTACCCCATTAGATACATCTTGCAATGGGGACCTCAAAGACCAAATTCGATGCAGTGTTTGCTCGGATGCTGCCATAAATTTGATTTCCAAGTTAACAACTATTGCCCCAAATGCTAATGCCACAAAATGTTTTTACTACATAGTGTTGTATGCTGCTGCTGTTGTTAATCCGTTTGGAATAACAGATGTAAGCACGACAAGTTGCATACTAGGCCTAGCGCAACCGTCCAGTGCAGAAATAAGGGGGTCATCAAATAAGAGAGGAAAAGTGATGAAGCTGGTTTTTTCGCTATTTGGTGCTGTTATTGGTGTTTTGCTTGCTTTTGCACTGATGGTGGTCATGTACAGGAAGTGGGAAAAGAGAAGAAAGGAAAATGTTCATCACAGGGAAGTTGAAAACGAGGTCAAGGCCTGTGTTTTGCCTAACACTGGTGCTAAATGGTTTCACATATCAGAGCTTGAACGTGCCACGAGTAAATTTTCAGATAGCAATATGATTGGCCGTGGTGGTGATGGAGTTGTGTACAAAGGAACTCTTTCAGATGGAACTGTGGTTGCAATTAAGGAATTTTTTGATTTGGAAACTAAAGGGGATGAAGATTTCTGCAATGAAGTGGAGATCATAAGCAACATAAAGCACAGGAATCTTCTTGCTCTTTGGGGCTGTTGCGTCACGAGTGATAATTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGCCTAATGGTACTCTCAGTTACCAATTGTCTCTTACTGGGGCTAACAGGCTAAAGTGGCCACAAAGAAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTTCCATCGTGACATAAAGACTACCAACATACTTTTGGATTCCAAAATGAATGCTAAATTAGCAGATTTTAGCTTGGTCAAACAAGGTCGTGAGGGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTACTTGGCACCAGAGTATGCTCTATATGGACAACTAACAGAGAAGAATGATGTGTACAGTTTTGGTATTGTGATTCTGGAAATCATGAGTGGTAGAAAAGTTCTTGATAATCTGAATTCATGTGCGGATTCAATCACGGATTGGGTATGGACACTTGCGGAATCAGCAATGATGGAGGAATTTTTTTATGATCCAATAAGAGGTGAAGGGCCACAAAAAGTTATGGAAAGATTTGTTCATGTTGGAATGCTATGTGCTCATGCAGTAGCGGCGTTAAGGCCAACTATTGCTGAGGCGCTTAAGATGTTAAAGGGTGATATTGACATTCCAGAATTACCTAACAGGCCAGTGCCACTAGGTCATGCATCCTTTCAGTCTTCTCTATTGAATGGTTTGCAAAAAAGTGATTAA 1797 0.4179 MILPLFMSLFTIFVAGVASSSCPMDLTYVETIPWNTSVCRDPIDKDSCCQTLSSIYAIGLAERLKENSIFYLPDVNTSSTCLSDFKDHLAALSIQPKMVSLCFPNPTQFVTNSSACAGIRTTQDWKQKVGMVTPLDTSCNGDLKDQIRCSVCSDAAINLISKLTTIAPNANATKCFYYIVLYAAAVVNPFGITDVSTTSCILGLAQPSSAEIRGSSNKRGKVMKLVFSLFGAVIGVLLAFALMVVMYRKWEKRRKENVHHREVENEVKACVLPNTGAKWFHISELERATSKFSDSNMIGRGGDGVVYKGTLSDGTVVAIKEFFDLETKGDEDFCNEVEIISNIKHRNLLALWGCCVTSDNLKGKRRFLVYDFMPNGTLSYQLSLTGANRLKWPQRKNIILDVAKGLAYLHYEIKPPIFHRDIKTTNILLDSKMNAKLADFSLVKQGREGQSHLTTRVAGTYGYLAPEYALYGQLTEKNDVYSFGIVILEIMSGRKVLDNLNSCADSITDWVWTLAESAMMEEFFYDPIRGEGPQKVMERFVHVGMLCAHAVAALRPTIAEALKMLKGDIDIPELPNRPVPLGHASFQSSLLNGLQKSD* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1219 598 SMART serkin_6 292 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1219 598 Gene3D Phosphorylase Kinase; domain 1 251 372 - -
Gso14g1219 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Gso14g1219 598 Pfam Protein kinase domain 293 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1219 598 PANTHER OS01G0253100 PROTEIN 14 590 IPR045271 GO:0004714|GO:0006468
Gso14g1219 598 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 590 - -
Gso14g1219 598 Gene3D Transferase(Phosphotransferase) domain 1 373 571 - -
Gso14g1219 598 ProSiteProfiles Protein kinase domain profile. 292 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1219 598 SUPERFAMILY Protein kinase-like (PK-like) 277 580 IPR011009 -
Gso14g1219 598 Pfam SPARK 19 176 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1219 Gso-Chr14 28790129 28792176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1219 14 595 Receptor kinase-like Gene Family AT1G11050 48.435 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gso14g1219 Pkinase 7.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1219 - - gmx:100800481 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1219 14 28790129 28792176 Gso13g0165 13 10270152 10272473 GST